Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0508 ATGGAGATCGGATTTCCGACTAACGTGCGCCATGTTGCCCATGTCACATTCGATAGGTTCAATGGTTTCTTGGGTTTGCCTGACGAGTTCGAACCCGAAGTGCCTAGAAGGCCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACGGAATCCATGCAGTTATCATTTGACACTAGAGGGAACAGTGTGCCAACAATTCTGTTGCTGATGCAAAGACGCCTGTATGCTGAAGGAGGGTTGCAGGCAGAGGGCATTTTCAGAATTAATGCAGAAAATAGCCAAGAGGAATACGTTAGGGACCAATTAAATAGTGGAGTGGTCCCAGAAGGCATCGATGTACATTGTTTAGCAGGACTTATCAAGGCTTGGTTTAGGGAACTGCCTATCGGCGTTCTGGATTCTTTATCACCTGAGCAGGTAATGCAATGCCAGACTGAAGAGGCGTGTGCTGAACTAGCCAGGAATCTTCCTCCTACGGAAGCTGCCCTCTTGGACTGGGTCATCAATCTGATGGCTGACGTTGTCCAACAGGAACATCTGAATAAGATGAATGCACGCAACATTGCCATGGTTTTTGCACCAAACATGACTCAGATGGCAGATCCTTTGACTGCATTGATGTATGCAGTTCAAGTGATGAACTTCTTGAAGACACTTATATTAAGGACACTGCGGGAAAGAAAGGATTCTGTGGTAGAATCTTCTCCTGGTTTTTATTTAAAGCCTTCTGATGAGAATGGTCACCATAGCCCTTTACAGTTCTGCAAGCAAGATTCTGCTCAAGAAAATGAAGAGGCTCAGGACTTGGTTGTTGAAAAAACTGTCATAGAATGGTCCCCTGGCTCTGATTCCCTCCAAGACATTACTTTAACTGGAGGAGAATCTGGCAGTTTGGTAACCTCTTCTGAAAATCTAGCACGTGATGAAGATTTGTACTGTGAGTTTCCACCTAAAGGAAATGTTGGGAAGAGTAAGACTGGCCAATCAAGTAATTCAAGTTCTAGAAAGGGACCCAAAAAAACAAGAGGCCAGCAACCCATGATTCAAGGAGCTGTGCCTGGCGAGAAAACTAAGGGAATTAGCAAACAGAGTCCCAAAGAATCAAGATCAGAGCGGACAGAACCCTGGCGAGGTCAAGGGAGCAATGGGAGATTTGTGCTGAAAGAAATAAGGATACCCACCCAGGAAGTTCTTCATGCTTGTAGGGAGGACGGAAGGCTGAAGCTCAACTTTGTTCAGCCTGATCATGATGAGTTTATAGAAGAAGAGGATGGGGAAGAAGATGATGATGAAGAAGAAAATACAGAAAAAGAAAATGATGCTTGTGTAACAGATCAAGTAAATGAAGAAAAGGAGATTGATGTCTAA 1371 0.4427 MEIGFPTNVRHVAHVTFDRFNGFLGLPDEFEPEVPRRPPSASATVFGVSTESMQLSFDTRGNSVPTILLLMQRRLYAEGGLQAEGIFRINAENSQEEYVRDQLNSGVVPEGIDVHCLAGLIKAWFRELPIGVLDSLSPEQVMQCQTEEACAELARNLPPTEAALLDWVINLMADVVQQEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTLILRTLRERKDSVVESSPGFYLKPSDENGHHSPLQFCKQDSAQENEEAQDLVVEKTVIEWSPGSDSLQDITLTGGESGSLVTSSENLARDEDLYCEFPPKGNVGKSKTGQSSNSSSRKGPKKTRGQQPMIQGAVPGEKTKGISKQSPKESRSERTEPWRGQGSNGRFVLKEIRIPTQEVLHACREDGRLKLNFVQPDHDEFIEEEDGEEDDDEEENTEKENDACVTDQVNEEKEIDV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0508 456 PANTHER MKIAA1688 PROTEIN 1 343 IPR044785 GO:0005096
Glsi04g0508 456 CDD RhoGAP 65 221 - -
Glsi04g0508 456 Gene3D Rho GTPase activation protein 36 232 IPR008936 -
Glsi04g0508 456 MobiDBLite consensus disorder prediction 283 305 - -
Glsi04g0508 456 CDD CRIB 1 41 - -
Glsi04g0508 456 MobiDBLite consensus disorder prediction 440 456 - -
Glsi04g0508 456 SMART RhoGAP_3 62 225 IPR000198 GO:0007165
Glsi04g0508 456 MobiDBLite consensus disorder prediction 323 341 - -
Glsi04g0508 456 Gene3D CRIB domain 1 33 IPR036936 -
Glsi04g0508 456 FunFam Rho GTPase-activating protein 5 33 226 - -
Glsi04g0508 456 Pfam P21-Rho-binding domain 2 29 IPR000095 -
Glsi04g0508 456 MobiDBLite consensus disorder prediction 361 375 - -
Glsi04g0508 456 Pfam RhoGAP domain 65 199 IPR000198 GO:0007165
Glsi04g0508 456 SUPERFAMILY GTPase activation domain, GAP 43 222 IPR008936 -
Glsi04g0508 456 ProSiteProfiles CRIB domain profile. 3 16 IPR000095 -
Glsi04g0508 456 SMART PBD_5 3 37 IPR000095 -
Glsi04g0508 456 Coils Coil 421 441 - -
Glsi04g0508 456 ProSiteProfiles Rho GTPase-activating proteins domain profile. 48 233 IPR000198 GO:0007165
Glsi04g0508 456 MobiDBLite consensus disorder prediction 418 439 - -
Glsi04g0508 456 Pfam Fantastic Four meristem regulator 381 412 IPR046431 -
Glsi04g0508 456 MobiDBLite consensus disorder prediction 413 456 - -
Glsi04g0508 456 MobiDBLite consensus disorder prediction 283 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0508 Glsi-ChrGlsi04 3459851 3467035 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1547 14 15863731 15868086 Glsi04g0508 04 3459851 3467035 CCT
Glsi04g0508 04 3459851 3467035 Glsi04g0508 04 3459851 3467035 ECH