Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1484 ATGGAGTGTCGCATCTATGGCGTTACCGAGCTCCGCATCTTCTGCACCTTTCTTTTGCTTCTTCTTTCCGGTTTTCCCCTTGCTTTGTCGGTCTCCTCTTCTTCTTACTCGATAAGCTCGGGTCAGATAAACTCCAACTCCGTTCTGGTGGCTCTTCTGGACTCGCATTACACAGAACTCGCAGAGCTGGTGGAGAAGGCTATGCTGTTGCAGACTCTAGAAGACACTGTCGGCAGCCACAACATCACCATTTTCGCACCCAGGAATGAAGCTCTCGAACGCGATCTTGACCCGGAGTTCAAGCGCTTTCTCCTCGAACCTGGCAACCTTAGGTCTCTCCAGACTTTGCTCATGTTCCACATCATTCCTACCCGAATCGGATCGGAACAGTTGCCCGCTCGCACCGGGTCAACCCGTCACAGTACGCTTTCTAATGACTACCTCCACCTTGCAAATAATGGAACTCGAGTATGGACAGTGGATCGCGCCAAGATCATCCACCCGGACGTGGTGACCCGACCCGATGGTGTCATCCACGGGATTGAACGACTCTTGGTCCCTCGTTCCGTACAAGGCGACTTCAACCGCCGACGAAGTCTCCAGTCTATTGCCGCAGTCAAGCCGGAGGGAGCACCGGAAGTTGATCCAAGGACTCATCGACTCAAGAAACCAGCTCCATCGGCGAAACTCGGTTCGCCACCAGCTTTGCCAATCTACGAGGCAATGGCTCCTGGACCAGCACTTGCTCCGGCTCCGGCACCAGGACCTGGCGGGGCCCACCACCACTTCAACGGTGAAGCCAAAGTCAAGGATTTCATTCAAACACTGCTCCATTACGGCGGGTACAATGAAATGGCAGATATTTTGGTGAATCTAACTTCCTTAGCTTCTGAAATGGGTCGGTTAGTCTCCGAGGGGTACGTGCTCACCGTTTTGGCTCCCAATGATGAGGCCATGGCTAAATTGACCACGGACCAATTGAGTGAACCTGGCGCACCCGAACAGATAATGTATTACCATCTCATACCGGAGTATCAAAGCGAAGAGAGTATGTACAATGCGGTTCGACGGTTCGGCAAGGTCCGGTACGATACCTTGCGATTACCGCATAAGGTGGTGGCCCAGGAGGCAGATGGGTCAGTGAAATTCGGGCAGGGAGACGGGTCCGCATATTTGTTCGACCCGGATATATACACGGATGGGCGGATCTCGGTGCAGGGAATTGATGGGGTATTGTTCCCACCGGAGGAGGAGGAGACGAAGTCCAGTCCCAGAACGGTTCAACCCGCCAAGGTAGTGGTCAAGCAGAGAAGAGGAAAATTGCTGGAGGTAGCTTGCTGGATGCTTGGAACCTTTGGACAAGACGGCAGATTCACCACTTGCCGTTGA 1389 0.5342 MECRIYGVTELRIFCTFLLLLLSGFPLALSVSSSSYSISSGQINSNSVLVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPEFKRFLLEPGNLRSLQTLLMFHIIPTRIGSEQLPARTGSTRHSTLSNDYLHLANNGTRVWTVDRAKIIHPDVVTRPDGVIHGIERLLVPRSVQGDFNRRRSLQSIAAVKPEGAPEVDPRTHRLKKPAPSAKLGSPPALPIYEAMAPGPALAPAPAPGPGGAHHHFNGEAKVKDFIQTLLHYGGYNEMADILVNLTSLASEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQSEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPPEEEETKSSPRTVQPAKVVVKQRRGKLLEVACWMLGTFGQDGRFTTCR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1484 462 Gene3D FAS1 domain 288 415 IPR036378 -
Glsi14g1484 462 ProSiteProfiles FAS1/BIgH3 domain profile. 269 397 IPR000782 -
Glsi14g1484 462 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 13 454 IPR044654 -
Glsi14g1484 462 FunFam Fasciclin-like arabinogalactan protein 16 264 415 - -
Glsi14g1484 462 MobiDBLite consensus disorder prediction 208 233 - -
Glsi14g1484 462 SUPERFAMILY FAS1 domain 248 416 IPR036378 -
Glsi14g1484 462 Gene3D FAS1 domain 48 188 IPR036378 -
Glsi14g1484 462 SMART fasc_3 310 415 IPR000782 -
Glsi14g1484 462 SMART fasc_3 83 188 IPR000782 -
Glsi14g1484 462 ProSiteProfiles FAS1/BIgH3 domain profile. 44 185 IPR000782 -
Glsi14g1484 462 Pfam Fasciclin domain 56 187 IPR000782 -
Glsi14g1484 462 Pfam Fasciclin domain 294 414 IPR000782 -
Glsi14g1484 462 SUPERFAMILY FAS1 domain 48 188 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1484 Glsi-ChrGlsi14 15293178 15295746 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1484 14 15293178 15295746 Glsi04g0581 04 3974107 3980671 CCT