Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0581 ATGGGGCATGAAGTCCATTTGTCGAAAATTCTGTTGACTGATGAGCAATATCAATTGCGAGCCCTATTTTATGGCAGCCTGGCCGCAGCATGCTATCCTACCTGCGTGTTCTGCAAGTTGACATTACTTTTTGATTCCGGTGCATTCTCTCGGGAAGCCATGGATTGTCGCCTCTACGGCGTCACTGAGCTCCGTATCTTCTGCTCCTATCTGCTTCTCCTTCTCTTCGGTTTTCCCCTCGCATTTTCGGATTTTCAGAATCCTAGGTTGTCGGTCGCTTCTGCTGCTTCTTCTACATCGGGTCAAATAAACTCGAACTCCATTCTGGTGGCTCTTCTGGACTCGCATTATACGGAACTTGCTGAGCTGGTGGAGAAGGCTATGCTATTGCAGACCCTCGAAGACACTGTCGGCAGCCACAACATCACCATCTTCGCACCCAGGAATGAAGCTCTCGAGCGCGATCTCGACCCCCAGTTCAAGAGGTTCCTTCTCGAACCCGGAAATATCAGGTCTCTCCAGTCTTTGCTCATGTTTCATATCATCCCCACTCGAATCGGATCGAGACAGTTAACGTCTCCGGCAGGGTCTACCCGTCACGAAACGCTCTCGAAGTCAGACTTCCTCCACCTAGCAAATAATGGGACCGGGGAATGGACAGTTGATCGCGCCAAGATTATCCACCCGGACGTATTGACCCGACCCGACGGCGTCATCCACGGGATTGAGCGCCTCCTGATCCCTCGTTCCGTACAAGATGACTTCAACCGCCGGCGGACTCTCCAGTCCATCACGGCGGTCAAGCCGGAGGGAGCACCAGAGGTGGACCCGAGGACACATCGGCTCAAGAAACCGGCTCCACCGGCGAAACCCGGTTCCCCACCGGCCTTGCCAATCTACGACGCCATGGCTCCTGGACCTTCCCTAGCCCCCGCGCCGGCGCCCGGACCAGGAGGGCCCCACCACCACTTCAATGGCGAGGCCCAAGTCAAGGATTTCATTCAGACACTTCTGCATTACGGTGGGTACAATGAAATGGCTGATATTTTGGTGAATCTGACATCCTTAGCAACCGAAATGGGTCGATTAGTGTCGGAGGGATACGTGCTTACCGTTCTGGCTCCGAATGATGAAGCCATGGCGAAACTGACCACGGACCAGTTGAGTGAACCGGGTGCACCCGAGCAGATAATGTACTACCATCTCATACCCGAGTATCAAACCGAAGAGAGTATGTACAATGCGGTTCGACGGTTCGGTAAAGTCCGGTACGACACTTTACGATTACCGCATAAGGTGGTGGCTCAGGAGGCAGATGGGTCGGTCAAATTCGGGCAGGGAGATGGGTCGGCTTATTTGTTCGACCCGGACATATATACGGATGGCCGGATCTCTGTGCAGGGTATCGATGGAGTTTTGTTCCCAGCGGAGGAGGAGGAGGCCAAACCCGTCACCCGGACGGTTCAACCCGCCAAGGTTGTGGTCAAGCAGAGAAGAGGAAAATTGCTGGAAGCAGCGTGCTGGATGCTTGGAACCTTTATACAGGATTCTAGATTCACCACTTGCCATTGA 1572 0.5375 MGHEVHLSKILLTDEQYQLRALFYGSLAAACYPTCVFCKLTLLFDSGAFSREAMDCRLYGVTELRIFCSYLLLLLFGFPLAFSDFQNPRLSVASAASSTSGQINSNSILVALLDSHYTELAELVEKAMLLQTLEDTVGSHNITIFAPRNEALERDLDPQFKRFLLEPGNIRSLQSLLMFHIIPTRIGSRQLTSPAGSTRHETLSKSDFLHLANNGTGEWTVDRAKIIHPDVLTRPDGVIHGIERLLIPRSVQDDFNRRRTLQSITAVKPEGAPEVDPRTHRLKKPAPPAKPGSPPALPIYDAMAPGPSLAPAPAPGPGGPHHHFNGEAQVKDFIQTLLHYGGYNEMADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIMYYHLIPEYQTEESMYNAVRRFGKVRYDTLRLPHKVVAQEADGSVKFGQGDGSAYLFDPDIYTDGRISVQGIDGVLFPAEEEEAKPVTRTVQPAKVVVKQRRGKLLEAACWMLGTFIQDSRFTTCH 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0581 523 ProSiteProfiles FAS1/BIgH3 domain profile. 104 246 IPR000782 -
Glsi04g0581 523 SMART fasc_3 143 249 IPR000782 -
Glsi04g0581 523 SMART fasc_3 371 476 IPR000782 -
Glsi04g0581 523 FunFam Fasciclin-like arabinogalactan protein 16 325 476 - -
Glsi04g0581 523 Pfam Fasciclin domain 116 248 IPR000782 -
Glsi04g0581 523 Pfam Fasciclin domain 356 475 IPR000782 -
Glsi04g0581 523 Gene3D FAS1 domain 323 476 IPR036378 -
Glsi04g0581 523 SUPERFAMILY FAS1 domain 106 249 IPR036378 -
Glsi04g0581 523 MobiDBLite consensus disorder prediction 266 321 - -
Glsi04g0581 523 Gene3D FAS1 domain 108 249 IPR036378 -
Glsi04g0581 523 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 16 87 520 IPR044654 -
Glsi04g0581 523 SUPERFAMILY FAS1 domain 309 476 IPR036378 -
Glsi04g0581 523 MobiDBLite consensus disorder prediction 287 301 - -
Glsi04g0581 523 ProSiteProfiles FAS1/BIgH3 domain profile. 330 458 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0581 Glsi-ChrGlsi04 3974107 3980671 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1484 14 15293178 15295746 Glsi04g0581 04 3974107 3980671 CCT