Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1380 ATGAAAGACGTTGCGGCAGATTCAACGCGTCCATTGTGTGAACACGGAGGATCAATGAAGTTGACTTTATTCAATGACTCGATTGAAGAGAAGTATCCACGGCTACCATGGTCAACAATATGCCTCCCTCAAATCTTGAGGTTTGTGGTCGGATCTATTGTTTATTCAGCGTGGGAACATGATGGTGAATTGTTTCTCATATCCATTCATTCGCATGTACAGGGAAAATATGCTGCAATATTGGTCTGCTGGCTTCTTGGCAATGGCTGTCTTTTCTCATGGAACAGTATGCTTACAATAGAAGATTACTACGGCTATTTGTTTCCGGATTACCACCCATCTCGGGTGCTTACTCTTGTGTATCAGCCATTTGCACTTGGAACTCTTGCAATACTGGCTTATAAGGAGGCAAAAATCAATACTAGAATACGGAACCTATTTGGATATTCTCTTTTTTTCTTGAGTACGCTGTTGGTGTTAATATTGGATTTAGCAACATCTGGTAAAGGAGGAATTGGAACTTTCCTTGGTGTATGTGCAATTAGTGGCGCTTTTGGAGTTGCAGATGCTCATGTGCAGGGTGGAATGATCGGAGACCTTTCTTACATGAGACCAGAGTTCATTCAGTCTTTCCTCGCTGGTTTGGCAGCATCAGGTGTGCTAACATCTTCTTTGAGGTTAATAACAAAAGCAGCATTTGAGAATTCCAAGGATGGTCTCCGCAAAGGAGCCATTTTATTCTTTGCCATATCGACATCCTTTGAACTCCTTTGTGTTCTTCTCTATGCATTTGTCTTTCCTAAACTACCAATTGTGAAGTACTACCGTTCAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGACCTTGCTGCTGGGGGCATCCAGACATTACCAGAAGGGGCAGAGGAGGATCCAAAACTACAAGAGCGGAAGGGAAACAAGCAATTGTTACTGGAAAACATTGATTATGCACTTGATATGTTCCTAATCTATGTGCTAACACTATCTATTTTCCCTGGATTTTTGTCAGAAGATACTGGATCACACAGTTTGGGCACCTGGTATGCTCTTGTGTTGATTGCAATGTATAACGTGACTGATCTGATAGGAAGATACATTCCACTCTTGAAATTCATCAAGTTGGAGTCCCGAAGATGGATCACCGTTGCAATTCTTTGTCGTTTCCTACTTATTCCCGCATTTTATTTCACTGCTAAGTATGGTGACCAGGGCTGGATGATACTCCTAACATCCTTCTTGGGGTTATCCAACGGTTACCTCACCGTCTGTGTTCTCACTTCTGCACCAAAGGGTTACAAGGGTCCGGAACAAAATGCCTTGGGAAATCTATTGGTGTTGTTTCTTGTTGGAGGTATTTTTGCTGGGGTCACACTTGACTGGTTGTGGTTAATAGGCAAAGGCTGGTGA 1434 0.4254 MKDVAADSTRPLCEHGGSMKLTLFNDSIEEKYPRLPWSTICLPQILRFVVGSIVYSAWEHDGELFLISIHSHVQGKYAAILVCWLLGNGCLFSWNSMLTIEDYYGYLFPDYHPSRVLTLVYQPFALGTLAILAYKEAKINTRIRNLFGYSLFFLSTLLVLILDLATSGKGGIGTFLGVCAISGAFGVADAHVQGGMIGDLSYMRPEFIQSFLAGLAASGVLTSSLRLITKAAFENSKDGLRKGAILFFAISTSFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTLPEGAEEDPKLQERKGNKQLLLENIDYALDMFLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVTDLIGRYIPLLKFIKLESRRWITVAILCRFLLIPAFYFTAKYGDQGWMILLTSFLGLSNGYLTVCVLTSAPKGYKGPEQNALGNLLVLFLVGGIFAGVTLDWLWLIGKGW 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1380 477 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 73 471 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 Pfam Nucleoside transporter 186 471 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 SUPERFAMILY MFS general substrate transporter 83 470 IPR036259 -
Glsi14g1380 477 PIRSF ENT 45 475 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 213 233 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 412 428 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 185 207 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi14g1380 477 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 449 473 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1380 Glsi-ChrGlsi14 14542511 14546399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1380 71 475 Organic Solute Cotransporters AT4G05120 71.605 0.0 600
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1380 14 14542511 14546399 Glsi04g0700 04 4956882 4958901 CCT
Glsi14g1380 14 14542511 14546399 Glsi14g1380 14 14542511 14546399 ECH