Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0700 ATGGTCAACAACAATGAGTCTCCCACCCGTCTTGAGGTTTGTAATCAGAACTCAGATATTTTACCACTTCAGAGTACTGAGAATATTAACGTAAATTATCTCACACAGAATGAATGGTATTTACAGGGAAAAAATGCTGCAATATTGGTCTGCTGGCTTCTTGGCAATGGTTGTCTTTTCTCATGGAACAGTATGCTCACAATAGAAGATTACTATGTCTACTTATTCCCGAACTATCACTCCCCTCGAGTGCTTACACTTGTATATCAGCCATTTGCACTTGTAACACTCGCAATATTGGCATATAATGAAGCAAAAATCAATACTAGAAAACGGAACCTATTTGGATATATGCTGTTTTTTATGAGTTCTCTGCTGGTGTTAATTTTGGATTTAGCAACATCTGGTAAAGGAGGACTTGGAACTTTCATTGGCATATGTGCAATCAGTGGAGCTTTTGGGATTGCAGATGCGCATGTGCAAGGTGGAATGGTCGGAGACCTTTCTTACATGCGGCCGGAGTTCATTCAGTCTTTCCTCGCTGGTTTGGCAGCATCAGGTGCACTAACCTCTGCTTTGAGGCTAATTACAAAAGCAGCATTTGAGAATTCCAAGGATGGTCTCCGCAAAGGAGCAATTTTATTCTTTGCCATATCATCACTATTTGAGTTGCTTTGTGTCCTTCTCTACGCATTTGCCTTTCCTAAACTACCTATCGTGAAATACTACCGTTCAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCGGATCTTGCAGCTGGAGGCATCCAGACATTACATGGAGAAGTTGATGAATATGAAAAATCACTAGGGAGGAAAGGAAACAAAGAATTATTACTGGAAAACATTGATTATGCCATTGACATGTTCTTGATATATGCTCTAACACTATCCATCTTCCCTGGATTCTTGTCAGAAGATACTGGATCCCATAGTTTGGGCAGCTGGTACGCCCTTGTTCTGATTGCAATGTTTAACGTTTGGGACCTGATCGGAAGATACATTCCACTATTGAAATGGCTAAAGTTGGAGTCTCGGAAGCTGCTGACGATAGCAATTCTTGCTCGGTTATTACTAGTGCCAGCATTTTATTTTACAGCAAAGTATGGTGACCAGGGATGGATGATGATGTTAACATCGTTCTTGGGGATATCTAACGGTTACCTCACTGTGTGTGTGATGACTTCGGCACCAAAAGGTTACAAGGGGCCGGAACAAAATGCCTTGGGAAACTTGTTGGTGTTGTTTCTCATAGGAGGTATATTTGCAGGGGTGGTACTTGACTGGTTGTGGTTAATAGGTAAAGGTTGGTGA 1338 0.4141 MVNNNESPTRLEVCNQNSDILPLQSTENINVNYLTQNEWYLQGKNAAILVCWLLGNGCLFSWNSMLTIEDYYVYLFPNYHSPRVLTLVYQPFALVTLAILAYNEAKINTRKRNLFGYMLFFMSSLLVLILDLATSGKGGLGTFIGICAISGAFGIADAHVQGGMVGDLSYMRPEFIQSFLAGLAASGALTSALRLITKAAFENSKDGLRKGAILFFAISSLFELLCVLLYAFAFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTLHGEVDEYEKSLGRKGNKELLLENIDYAIDMFLIYALTLSIFPGFLSEDTGSHSLGSWYALVLIAMFNVWDLIGRYIPLLKWLKLESRKLLTIAILARLLLVPAFYFTAKYGDQGWMMMLTSFLGISNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLIGGIFAGVVLDWLWLIGKGW 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0700 445 PIRSF ENT 15 443 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi04g0700 445 Pfam Nucleoside transporter 155 439 IPR002259 GO:0005337|GO:0016020|GO:1901642
Glsi04g0700 445 SUPERFAMILY MFS general substrate transporter 45 439 IPR036259 -
Glsi04g0700 445 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 41 439 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0700 Glsi-ChrGlsi04 4956882 4958901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0700 32 443 Organic Solute Cotransporters AT4G05120 70.388 0.0 601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1380 14 14542511 14546399 Glsi04g0700 04 4956882 4958901 CCT
Glsi04g0700 04 4956882 4958901 Glsi04g0700 04 4956882 4958901 ECH