Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1377 ATGGCGGCTGTTACTTATTTGTCTTACTCTGCATTAAGTCAATGTTCTCAAAGGAAAGGGATTGTACCTTCGACTCGTTTCCTGGGATCGAATACCGACGCCTTTCGGTTGCAGATGAATTTTTCGTATCATTATGTAGGTGTTCGAGCTTCGAATTCGGCTCCGAAAACGATTCAATGCATGTCTTCTGTGACAGACCCTCCCACTGCTTCTGAGACAAAGTTAAATTTCCTCAAGGCATATAAGCGACCAATCCCTAGTATCTACAACACTGTGCTGCAGGAACTCATTGTCCAGCAACATTTGACGAGATACAAGAGATCATACCGCTATGACCCAGTATTTGCTCTTGGTTTTGTCACTGTATATGATCAACTTATGGATGGGTATCCTAGTGATGAGGATCGAGATGCCATCTTCCAGGCATACATTAATGCATTGAAGGAAGATCCAGACCAATACAGAATAGATGCACAGAAGTTGGAAGAGTGGGCTAAGGCTCAAAATCCAACTTCCCTCGTTGATTTTTCATCTAGAGAAGGAGAAGTTGAGGGGATATTAAAGGATATTGCAGAAAGAGCAGGGGGAAAGGGGGATTTCAGTTACAGTCGCTTCTTTGCAGTAGGCCTTTTTCGTCTCCTTGAGTTGGCAAATGCAACAGAACCGACAATTTTGGAAAAGCTTTGTGTGGCTTTGAACATTAACAAAAGAAGTGTTGATCGGGACTTGGATGTGTATCGTAATCTGCTTTCCAAGTTGGTTCAAGCAAAAGAGCTGTTGAGGGAATATGTTGACAGGGAGAAGAAAAAAATGGAAGAAAGAGCCGAATCACAAAAGGCTAATGAGGCAATCACAAAATGTTTGGGACAAGGTCAATATTCTGGCCTTTAG 891 0.4242 MAAVTYLSYSALSQCSQRKGIVPSTRFLGSNTDAFRLQMNFSYHYVGVRASNSAPKTIQCMSSVTDPPTASETKLNFLKAYKRPIPSIYNTVLQELIVQQHLTRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRDAIFQAYINALKEDPDQYRIDAQKLEEWAKAQNPTSLVDFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPTILEKLCVALNINKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKMEERAESQKANEAITKCLGQGQYSGL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1377 296 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 1 293 IPR017499 GO:0010207|GO:0015979
Glsi14g1377 296 Hamap Protein Thf1 [thf1]. 64 272 IPR017499 GO:0010207|GO:0015979
Glsi14g1377 296 Coils Coil 246 281 - -
Glsi14g1377 296 Pfam Thylakoid formation protein 69 274 IPR017499 GO:0010207|GO:0015979
Glsi14g1377 296 NCBIfam photosystem II biogenesis protein Psp29 66 270 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1377 Glsi-ChrGlsi14 14503328 14507047 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1377 14 14503328 14507047 Glsi04g0708 04 5027109 5035314 CCT
Glsi14g1377 14 14503328 14507047 Glsi14g1377 14 14503328 14507047 ECH