Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1361 ATGAGGCGAAGAGCGGTGGAATTTCGAAGGCCAGTGAGGAGAAGGGTAGCGGATGTAGTGTGGTGGGCATTGTGTAGCGTAGTGGTTCTACTTTTTATATATATTCTGAGCAAAGGGAGTCAGATTGAGCCGAGACCAGCTTTATCCAAGAGAATTAACAAGAATAATAGGATTATGGAAGTCCTTAATATTACTGAAGAGATGTTAAGCCCTAAGTCAGCGACCAGACAACTGAATGATCAGATGTCCCTAGCAAAAGCTTTTGTTGTAATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAATTAAGTGCCAAGATCCGCAGTTCACAGATTCTCCTCTCAAATGCTGCCACAAGGCAAGCTCCTTTAACAACCAGAGAATCAGAAGTTGCTATTCAAGATTTAGCATTATTGCTATACCAGGCCCAGCAGCTCCATTATGACAGTGCAACCATGATCATGAGAGTTAAAGCCAAAATACAAGCTCTTGAAGAGCAGATGAATTCTGTAAATGAAAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGGATTCCCTAAAAGCCTATACTGCCTTGGTGTGCGGTTGACAACTGAATGGTTCAAAAGTCTTAGTTTGCAAAAGAAATTGAAGGAGAAAAGGCTAGTGGAGAGGAAACTTAAGGATAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATTCTTGCTACTTCAGTAGTGGTTAATTCAACTTCAATAAATTCTAAAAATCCAGATATGGTTGTTTTCCACCTTGTGACTGATGAAATAAATTATGCTGCAATGAAGGCATGGTTTGCCATGAATAACTTTCATGGAGTGACTGTGGAGGTTCAAAAGTTTGAAGACTTTGGTTGGTTAAATGCTTCATATGTTCCTGTTCTTAAGCAACTTCAGGACTCAGAAATACAAAATTATTACTTTTCTGGCACTGGTGATGATGGCAGGACACCCATCAAGTTTCGTAACCCTAAGTATTTATCCATGCTCAACCACCTGAGGTTTTATATCCCTGAAGTTTTTCCTGCATTGAAGAAGGTGGTGTTCCTTGATGATGATGTTGTGGTTCAGAAGGATATATCTGCTCTTTTTTCCATTGATTTGAATGGCAATGTTAATGGAGCTGTGGAGACATGCATGGAAACATTCCATAGATACCACAAATATTTGAATTACTCCCATCCTCTTATACGAGCACATTTTGATCCTGATGCATGTGGATGGGCGTTTGGAATGAACGTATTTGATTTGGTAGAATGGAGGAAAAGGAATGTGACAGGCATCTACCACTACTGGCAGGAAAAGAATGTGGACCGGACATTGTGGAAACTTGGTACGTTGCCACCTGGACTGTTGACATTTTATGGATTAACTGAACCCTTGGATTCGTCATGGCATGTATTGGGGTTTGGCTACACAAAAGTTGATCCTCAATTGATAGAGAGCGGGGCTGTACTGCACTTTAATGGCAACTCCAAACCATGGTTGAAGATTGGGATTGAAAAGTACAAGCCCCTATGGGAAAAATACGTTGGCTTTTCTCACCCTTTTTTGCAACAGTGCAACTTTCGTTGA 1602 0.4026 MRRRAVEFRRPVRRRVADVVWWALCSVVVLLFIYILSKGSQIEPRPALSKRINKNNRIMEVLNITEEMLSPKSATRQLNDQMSLAKAFVVIAKESNNLQFAWELSAKIRSSQILLSNAATRQAPLTTRESEVAIQDLALLLYQAQQLHYDSATMIMRVKAKIQALEEQMNSVNEKSSKYGQIAAEGFPKSLYCLGVRLTTEWFKSLSLQKKLKEKRLVERKLKDNNLYHFCVFSDNILATSVVVNSTSINSKNPDMVVFHLVTDEINYAAMKAWFAMNNFHGVTVEVQKFEDFGWLNASYVPVLKQLQDSEIQNYYFSGTGDDGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDISALFSIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNVFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDSSWHVLGFGYTKVDPQLIESGAVLHFNGNSKPWLKIGIEKYKPLWEKYVGFSHPFLQQCNFR 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1361 533 Coils Coil 155 175 - -
Glsi14g1361 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 65 532 IPR029993 GO:0047262
Glsi14g1361 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 228 532 IPR029044 -
Glsi14g1361 533 CDD GT8_like_1 228 520 - -
Glsi14g1361 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 227 524 IPR029044 -
Glsi14g1361 533 Pfam Glycosyl transferase family 8 235 507 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1361 Glsi-ChrGlsi14 14415437 14418598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1361 1 532 Glycosyltransferase AT2G20810 79.065 0.0 867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1361 14 14415437 14418598 Glsi04g0720 04 5093717 5097929 CCT
Glsi14g1361 14 14415437 14418598 Glsi14g1361 14 14415437 14418598 ECH