Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0720 ATGGGGCTGTGTGGTCATCCCAAAGCTGACCGTCGTCAAGACTTAGGAACAGAGGCACAAAATAATCAACATTTCGGCATTGGGAAAGAAACAAATGCACATGTTATTTGGGCGGAAGAGACTAAGATCAAAGTCTTATTTGTTGCTGACATGGCACGATCAGAGCCGGCTGCTGATTTTCGAAGGCCAGTAAGAAGGAGGGTCCCGGATGTGTTGTGGTGGGCATTGTTTAGCGTAGTGGTTCTTCTCTTTATTTATATTCTTAGCAAAGGGAGTCAGGTTGAGACGAGACCGGCTTTATCTAAGAGAACTTACAGGCATGATAGGATTATGGAAGAGCTTAATGTTACTGCAGAGATGTTAAGCCCCAACTCAGTGACCAGACAACTAAATGACCAAATATCCCTAGCGAAAGCTTTTGTTGTCATTGCAAAAGAAAGTAACAATCTCCAATTTGCTTGGGAGTTAAGTGCCCAGATCCGCAATTCAAAGATTCTTCTCTCAAAGGCTGCCACAAGGAGAGCCCCTTTAACAACCAGGGAATGCGAAAGTGCTATCCGTGATATGGCATTATTGCTATACCAGGCCCAGCAGCTCCATTATGACAGTGCAACAATGATCATGCGACTGAAAGCCAAAATTCAAGGTCTTGATGAACAAATGAATTCTGTAAGTGAAAAGAGTTCAAAATATGGACAAATAGCAGCTGAAGAAGTCCCAAAAAGCCTATACTGCCTTGGTGTCCGGTTGACAACTGAATGGTTCAGAAACCTTAATTTGCAAAAGAAATTGATGAACAAGAAGCAAGTGGGGATGAAATTGAAAGACAACAATCTTTACCACTTTTGTGTGTTCTCTGATAACATTCTTGCAACTTCAGTTGTGGTCAATTCAACTGCAATAAATTCTAAAAATCCAGATATGGTTGTTTTCCACCTTGTCACTGATGAAATAAATTATGCTGCGATGAAGGCATGGTTTGCCATGAATAATTTCCGAGGAGTGACTGTTGAGGTTCAAAAGTTTGAAGACTTCAGTTGGTTAAATGCTTCATATGTTCCTGTTCTTAAGCAACTTCAAGACTCAGAAATACAGAACTACTACTTCTCTGGCAATAGTGATAATGGCAGGACACCAATCAAGTTTCGTAACCCTAAATATCTCTCCATGCTTAACCATCTGAGGTTTTATATCCCAGAAGTTTTTCCTGCACTTAAGAAGGTGGTGTTTCTCGATGATGATGTTGTGGTTCAGAAGGATCTCTCTGCTCTATTTTCCATTTATTTGAATGGCAATGTTAATGGAGCTGTTGAGACATGCATGGAGACATTTCACAGATACCATAAATATTTGAATTACTCCCATCCTCTTATACGGGCACATTTTGATCCTGATGCATGTGGGTGGGCATTTGGGATGAATATATTTGATTTGGTTGAATGGAGGAAAAGGAATGTAACAGGCATCTACCACTACTGGCAGGAAAAGAATGTTGACCGGACGTTGTGGAAACTCGGCACCTTACCACCTGGACTGTTGACATTTTATGGATTAACTGAGCCCTTGGATCTGTCATGGCATGTATTGGGATTTGGCTATACAAATGTTGATCCTCAGTTGGTAGAGAAGGGCGCTGTACTGCACTTTAATGGGAACTCGAAACCATGGTTGAAAATTGGGATCGAAAAGTACAAGCCAATATGGGAAAAATATGTTGATTATTCTCATCCTTTTTTGCAACAATGCAACTTTCATTAA 1758 0.4073 MGLCGHPKADRRQDLGTEAQNNQHFGIGKETNAHVIWAEETKIKVLFVADMARSEPAADFRRPVRRRVPDVLWWALFSVVVLLFIYILSKGSQVETRPALSKRTYRHDRIMEELNVTAEMLSPNSVTRQLNDQISLAKAFVVIAKESNNLQFAWELSAQIRNSKILLSKAATRRAPLTTRECESAIRDMALLLYQAQQLHYDSATMIMRLKAKIQGLDEQMNSVSEKSSKYGQIAAEEVPKSLYCLGVRLTTEWFRNLNLQKKLMNKKQVGMKLKDNNLYHFCVFSDNILATSVVVNSTAINSKNPDMVVFHLVTDEINYAAMKAWFAMNNFRGVTVEVQKFEDFSWLNASYVPVLKQLQDSEIQNYYFSGNSDNGRTPIKFRNPKYLSMLNHLRFYIPEVFPALKKVVFLDDDVVVQKDLSALFSIYLNGNVNGAVETCMETFHRYHKYLNYSHPLIRAHFDPDACGWAFGMNIFDLVEWRKRNVTGIYHYWQEKNVDRTLWKLGTLPPGLLTFYGLTEPLDLSWHVLGFGYTNVDPQLVEKGAVLHFNGNSKPWLKIGIEKYKPIWEKYVDYSHPFLQQCNFH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0720 585 Pfam Glycosyl transferase family 8 287 559 IPR002495 GO:0016757
Glsi04g0720 585 SUPERFAMILY Nucleotide-diphospho-sugar transferases 280 583 IPR029044 -
Glsi04g0720 585 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 282 578 IPR029044 -
Glsi04g0720 585 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 111 584 IPR029993 GO:0047262
Glsi04g0720 585 MobiDBLite consensus disorder prediction 1 23 - -
Glsi04g0720 585 CDD GT8_like_1 280 573 - -
Glsi04g0720 585 Coils Coil 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0720 Glsi-ChrGlsi04 5093717 5097929 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0720 53 585 Glycosyltransferase AT2G20810 80.187 0.0 880
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1361 14 14415437 14418598 Glsi04g0720 04 5093717 5097929 CCT
Glsi04g0720 04 5093717 5097929 Glsi04g0720 04 5093717 5097929 ECH