Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1193 ATGTGGAGAGATAGTGGAGCTCCTGCTGATTCATTCTACGAAATCCGCCCCGAGTACATCGGTGATGTCCCCAAAACTCGATTTAAGATCAAGACTGGCAAAACACTAAGTGCAAGGAAATGGCATGCTGCATTTAGTCCAGAAGGGTATCTGGACATAGGCAAGACTCTAAGCCGAATCCACCGAGGGGGAATCCATCCATCAATTAGAGGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGACCCAAAGAGTACATTTGATGAAAGAGATCAGATAAGACAGCACCGAAGGATGCAATATGCGAGATGGAAAGAAGAATGCCGCCAATTGTTTCCTCTTGTTGGAAGTGGTAGATTTATTACAGCACCAGTTATCACCGAAGATGGTCAACCTATTCAAGATCCATTGGTGCTGTTAGAAATAAATCCAGACAAGGGAGTGGTTGTACCTGCTCAAGATAATTATATGGGTGGTGCCAATAGCATGAACTCTTCAAGTACAGTCGCTGCAAATAATTTAGAAAATGTGAAGGATAAGAGAATAACCCAGTGGATGTTAACTCTTCATCAAATAGGTCTTGACGTGATTCGCACTGATAGGACACTGGTTTTCTATGAGAAGAAAGAGAACTTGTCAAAACTATGGGATGTTCTTGCTGTTTATGCTTGGATAGATACAGAAGTGGGTTATTGCCAAGGAATGAGTGACCTATGCTCCCCTATGATAATTCTTCTCAATGATGAAGCTGATGCATTTTGGTGCTTTGAGCGTTTGATGCGCAGATTGCGGGGAAATTTCAGATGCACTGATAGCTCAGTTGGGGTGGAGACTCAACTAAGTAATTTGGCTTCAATTACTCAAGTCATTGATCCAAAACTTCATCAGCATTTAGAGACTCTTGGTGGAGGTGACTATTTGTTCGCATTTCGGATGCTTATGGTTTTATTTCGTCGAGAATTCTCCTTTTGTGACTCACTGTACCTTTGGGAGATGATGTGGGCTCTGGAATACGATCCTGACTTGTTCTTGATGTATGAAGAGCCTAAATCAGCTTCTGAAAGAGCTGATGGATTTAAAGGAAAAGCAAAGTCAATACGTCAATGTGGGAAGTATGAGAGAGAAAATAAAAAAAATGGAGCAAAGAATGCTGAAGCTCCTCTTCCCATATCTGTTTTCCTTGTTGCCAGTGTGTTGAAAGATAAGAGCTCAAAACTTCTGACGGAAGCTCGTGGCCTGGATGATGTTGTCAAGATATTGAATGACATGACCGGAAATTTAGATGCCAAAAAAGCTTGCACTGGGGCAATGAAACTTCACAAAAAATATTTGAAGAAGGCCAATGCCAATAAGACATAG 1359 0.4143 MWRDSGAPADSFYEIRPEYIGDVPKTRFKIKTGKTLSARKWHAAFSPEGYLDIGKTLSRIHRGGIHPSIRGEVWEFLLGCYDPKSTFDERDQIRQHRRMQYARWKEECRQLFPLVGSGRFITAPVITEDGQPIQDPLVLLEINPDKGVVVPAQDNYMGGANSMNSSSTVAANNLENVKDKRITQWMLTLHQIGLDVIRTDRTLVFYEKKENLSKLWDVLAVYAWIDTEVGYCQGMSDLCSPMIILLNDEADAFWCFERLMRRLRGNFRCTDSSVGVETQLSNLASITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEPKSASERADGFKGKAKSIRQCGKYERENKKNGAKNAEAPLPISVFLVASVLKDKSSKLLTEARGLDDVVKILNDMTGNLDAKKACTGAMKLHKKYLKKANANKT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1193 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 275 443 IPR035969 -
Glsi14g1193 452 Gene3D - 273 451 - -
Glsi14g1193 452 Pfam Rab-GTPase-TBC domain 173 335 IPR000195 -
Glsi14g1193 452 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 162 267 - -
Glsi14g1193 452 FunFam TBC1 domain family member 15-like 169 267 - -
Glsi14g1193 452 ProSiteProfiles TBC/rab GAP domain profile. 64 337 IPR000195 -
Glsi14g1193 452 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 40 297 IPR035969 -
Glsi14g1193 452 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 36 421 - -
Glsi14g1193 452 SMART tbc_4 61 360 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1193 Glsi-ChrGlsi14 13039087 13047515 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1193 14 13039087 13047515 Glsi04g0949 04 7587249 7598616 CCT
Glsi14g1193 14 13039087 13047515 Glsi14g1193 14 13039087 13047515 ECH