Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0949 ATGAGTACCCGGAACGGACGGGAATCTCTGTTCAGAGCCAGGAACTTTTCCGGTGTGATCGCTGCAGCAGCATCGGCGTCGGCGAGGTCAAAGCTTGAATGGGATTTACAAGGACTCCTGCGACAATGTAAGAAGAACTTGGAAAGGTTTACAGAGTGGGAAAAAAGAAAAAGAGAGTACCTGCCCAAGCTGAATCCTGCTCATATTCTATTCCCGGGGAAAAAGTTGGTCAACTCTACGTCCCCTGTTGGTTGGTTTCTTTCCATCTTTGACCATCGTCCAGGGTGCTGGGATTCTGGAACTCCTGCTGATTCTTTCTATGAAACCCGGCTTGAGTGCACCGATGTCCCCAAAACTCGATTTAAGATCAAGGCTGGTAAAACACTAAGTGTAAGAAAATGGCAGGCTGCATTTAGTCCAGAAGGGCATCTGGATATAGGCAAGACTCTGAGCCGAATACACCGGGGGGGAGTCCATCCCTCAATCAGAGGAGAAGTTTGGGAATTTCTACTTGGTTGCTATGACCCAAGGAGTACATATGAGGAAAGAGATCAGATAAGACAGTTCCGGAGGGAACAATATTCTAAGTGGAAGGAAGTATGCCACCAATTGTTTCCTCTTGTTGGAAGTGGTAGATATATTACAGCACCTGTAATCACTGAAGATGGTCAGCCAATTCAAGATCCACTAGTGCTTTTAGAAACAAATCCAGGCAAGGGTGCGGTTTTACCTCCTCAAGATAACAATGGGGGTGGTGTCAGTACGGGTGCTGCAAATAATTTAGAAAAGGTGACGGACAAGAGAGTAATTCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACACTGGTCTTTTATGAGAAGCAAGAAAACTTGTCAAAATTATGGGATATTCTTGCTGTTTATGCTTGGATAGATACAGATGTTGGCTATTGTCAAGGAATGAGTGATCTATGCTCCCCTATGATAATGCTTCTGGAAGATGAAGCTGATTCATTTTGGTGCTTTGAACGTCTGATGCGCAGATTGCGAGGAAATTTCAGATGCACTGATAGCTCTGTTGGTGTGGAGGCACAACTGAGTAATTTGGCTTTAATTACTCAAGTCATTGATCCAAAACTTCATCAACATTTAGAGACTCTCGGTGGAGGTGACTATCTATTTGCTTTTCGGATGCTTATGGTTTTGTTTCGTCGAGAATTCTCCTTCTGTGACTCACTGTACCTTTGGGAGATGATGTGGGCTCTAGAATACGATCCTGACTTGTTCTTGATGTATGAAGAGCCTGAATTAGCTTCTGAAAAAACTGATGGATCTAAAGGAAAAACAAAGTCAAAAAGTCAGTGTGGGAAGTATGAGAGAGAAAATATGAGAAATGGAGCAAATACTTCTCAAGCTCCTCTTCCCATATCTGTTTTTCTTGTTGCCAGCGTGTTGAAAGATAAGAGCACAAAACTACTTCAGGAGGCACGGGGTCTTGATGATGTTGTCAAGATATTGAATGACATGACCGGCAACCTGGATGCCAGAAAGGCTTGCATTGGAGCAATGAAACTGCACAAGAAGTATTTGAAAAAGGCCAAGAAGACGTAG 1614 0.4356 MSTRNGRESLFRARNFSGVIAAAASASARSKLEWDLQGLLRQCKKNLERFTEWEKRKREYLPKLNPAHILFPGKKLVNSTSPVGWFLSIFDHRPGCWDSGTPADSFYETRLECTDVPKTRFKIKAGKTLSVRKWQAAFSPEGHLDIGKTLSRIHRGGVHPSIRGEVWEFLLGCYDPRSTYEERDQIRQFRREQYSKWKEVCHQLFPLVGSGRYITAPVITEDGQPIQDPLVLLETNPGKGAVLPPQDNNGGGVSTGAANNLEKVTDKRVIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDTDVGYCQGMSDLCSPMIMLLEDEADSFWCFERLMRRLRGNFRCTDSSVGVEAQLSNLALITQVIDPKLHQHLETLGGGDYLFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLMYEEPELASEKTDGSKGKTKSKSQCGKYERENMRNGANTSQAPLPISVFLVASVLKDKSTKLLQEARGLDDVVKILNDMTGNLDARKACIGAMKLHKKYLKKAKKT 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0949 537 Gene3D - 360 537 - -
Glsi04g0949 537 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 129 508 - -
Glsi04g0949 537 SMART tbc_4 154 447 IPR000195 -
Glsi04g0949 537 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 362 530 IPR035969 -
Glsi04g0949 537 FunFam TBC1 domain family member 15-like 256 354 - -
Glsi04g0949 537 ProSiteProfiles TBC/rab GAP domain profile. 157 424 IPR000195 -
Glsi04g0949 537 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 134 384 IPR035969 -
Glsi04g0949 537 Pfam Rab-GTPase-TBC domain 266 422 IPR000195 -
Glsi04g0949 537 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 257 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0949 Glsi-ChrGlsi04 7587249 7598616 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1193 14 13039087 13047515 Glsi04g0949 04 7587249 7598616 CCT