Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1179 ATGACCACAAACTATCACCGACAATATCAGATCATGGAGAAGCTCTCCCCTTTTCCGTGGAACAATGAAATTGCTTATGCAACTACTTATTCGGGTTTGGATCGGAAAATTCGGGTTGGTCCAATCATCATTGGATCTGGGCGCGTATGTTTGTCAGTCTGTCATGAGATATGGTTGGAAGGGCTTTGTCCTTATGCCTTCGTGTTTTGGAAAAAAGTTGCTATTTTCATCTCTTTGGTTCTGGGGATGAGGAATGATAGTCAGAAATTACAGCAGGGAGGTGAACCTCGCTCGGGTCGAACCAACGGGTTTTTTCCCAGCTCATTCCGCGCTTTCTCCAGTTACCTGAGGATCGTTTCATCCGGTGCTTCCACCGTTGCGCGGTCTGCAGCATCCGTTGCGTCCTCGATTGTGGATAGGGATGATGACGCGAACTCTGACCAGGTTATCTGGGCTGGGTTTGACAAGTTAGACAGTGAGGGAGAAGTCATTCGCCAAGTTCTTCTTTTAGGTTTTCGGACTGGCTTCCAAGTTTGGGATGTTGAAGATTCAAATAATGTACATGACCTGGTTTCCAGACATGATGGTCCTGTTTCTTTTATGCAAATGCTACCAAAACCAATTGCATCAAAGAGACCAGCAGACAAGTTTGCAGGCAGGCGCCCACTGTTGGTAGTAGTCTGTGTTGATGGTTTCTTTGCTGGAGGCAGTAACATTCAGGATGGGTTGGCTACCCCTGGCAATGGGAGCACTTCAAGCTGCCATGACCAAGTGAATGGAAATTATCTGCCAACTACTATCCAGTTTTATTCCTTGAGATCCCAATCATTTGTTCATGTACTAAAGTTTAGATCAGCTGTTTATTCTGTAAGGTGCAGTTCTCGAGTAGTTGCTGTTTCTCTATCCACTCAGATACACTGTTTTGATGCCACAACATTAGAAAGGGAATATACTCTACTTACCAATCCTGTAGTTGTGAGTTGTCCTAGCTTTGGAGGCATAGGCTACGGACCACTGGCTTTGGGTCCAAGATGGCTGGCTTATAGTGGAAGCCCAGTGGCAATCACCGATTCTGGGCATGTCAGTCCACAACATCTCACACCTTCTGCAAGTTTTGCTGGTTTTTCTTCAAATGGGAGCTTGGTTGCACACTATGCCAAAGAGTCAAGCAAGCAACTTGCTGCTGGGATTGTGTCCTTTGGAGATATGGGGTATAAGAAACTTTCCAGATACTGCTCTGAGCTTCTGTCTGATAGCAATAGTTCTTTGCGTTCTGTAAATTCGGGCTGTAGGGGCAATGGAATCATTAGTGGCCATTCAGTAGATGCAGACAACATTGGAATGGTTATTGTGAGAGATATTGTCAGTAAAAACGTTGTTGCCCAACTGCAGGCCCACAAAAGTCCTATTTCAGCCTTATGCTTTGATCCTAGTGGCACCATTTTAGTGACTGCTTCAGTTCAGGGACATAATATAAATGTTTACAAGATAATGCCTGGACACTCTGCAAATTCATCGGCATCTGATGCTGGCCCTTCTAATATCCATCTGTACCGGTTGCAACGTGGCTTTACTAATGTTGTCATACAGGATATCAGTTTCAGTGATGACAGCAATTGGATATTGATAAGTTCCTCAAGGGGCACTAGCCATGTATTTGCTATAAATCCTCAGGGAGGATCTGTGAATATTCAGTCCTATGATTCTAGTTTTACTGCACAAAATAGTGGATTGGGAGTTATGACTAATCGAGCAGTTCTCAATCCTCAAGGTTCAGCCTTGCAAATGCCTAAACAGCATAACCTGTGTGCAACTGGTCCTCCAATCACACTTTCTGTTGTAAGCAGAATTAGGAATGGAACTAATGGCTGGAAAGGCACTGTAAGTGGTGCTGCTGCAGCTGCAGCTGCAACAAGTAGAATGAGTTCCCTTTCTGGGGCTATTGCTTCATCTTTCTGTAACTGCAAAGGCAGTGCCTTGTATGCTGATGGAAAGTTTTCTCAGACAAAGTATCATCTACTGGTTTTTTCTTCTTCTGGTTCAATGATACAATATGCTCTGCGGATATTAAAGGGTCGAGATTCAGCAGTTGTTTCAGGATTAACCCCAGGTTCTGAATCAGCTCCAATGGCTGATGCGAGATTAGTAGTGGAAGCTATACAGAAATGGAATATACGTCAGAGATCTAATCTACGAGAGCAGGAAAATAGCATTGACATATATGGTGAGAATGGAATTTCAGACAGCAATAAAATATATCCTGAAGAATTGAAAGGGGATAATATCACTGGCCCAAAACTCAAGAACGAAGTTGTGAAAGCAACTTCCTGTTCTGAGGAAGAGCATCATTTGTTTATATCCCAAGCTGAACTGCAGATGCATCGAACTCGGACTCCATGGTGGGCAAATCCTGAGATATATTTTCATTCAATGGTGAAAGAAGCTACCATAATGGCTGAAGATGTTTCAGGAGGGGAAATTGAGATTGAAAGGATACCAACTCGCTTGATTGAAGCTAGGTCAAAAGGCTTAGTTCCTATTGACTATCTTCAGACCCCAAAATTCCAACAAACAAGGACTTCTGCTCGAGATAGAAAGACAAAGGAGCAATTGTTGCATCATAGTACTGGGATGTCTGAAAATGGCAGGATTTCAGCCAGTAGTTTTTTGGGCTCTCCTGACTGTATTACAAATTGCAATGGCATTCAAGGATCTGAGTGGGATCATCATCTGATAGTGACAGAGAATATCTGA 2754 0.4339 MTTNYHRQYQIMEKLSPFPWNNEIAYATTYSGLDRKIRVGPIIIGSGRVCLSVCHEIWLEGLCPYAFVFWKKVAIFISLVLGMRNDSQKLQQGGEPRSGRTNGFFPSSFRAFSSYLRIVSSGASTVARSAASVASSIVDRDDDANSDQVIWAGFDKLDSEGEVIRQVLLLGFRTGFQVWDVEDSNNVHDLVSRHDGPVSFMQMLPKPIASKRPADKFAGRRPLLVVVCVDGFFAGGSNIQDGLATPGNGSTSSCHDQVNGNYLPTTIQFYSLRSQSFVHVLKFRSAVYSVRCSSRVVAVSLSTQIHCFDATTLEREYTLLTNPVVVSCPSFGGIGYGPLALGPRWLAYSGSPVAITDSGHVSPQHLTPSASFAGFSSNGSLVAHYAKESSKQLAAGIVSFGDMGYKKLSRYCSELLSDSNSSLRSVNSGCRGNGIISGHSVDADNIGMVIVRDIVSKNVVAQLQAHKSPISALCFDPSGTILVTASVQGHNINVYKIMPGHSANSSASDAGPSNIHLYRLQRGFTNVVIQDISFSDDSNWILISSSRGTSHVFAINPQGGSVNIQSYDSSFTAQNSGLGVMTNRAVLNPQGSALQMPKQHNLCATGPPITLSVVSRIRNGTNGWKGTVSGAAAAAAATSRMSSLSGAIASSFCNCKGSALYADGKFSQTKYHLLVFSSSGSMIQYALRILKGRDSAVVSGLTPGSESAPMADARLVVEAIQKWNIRQRSNLREQENSIDIYGENGISDSNKIYPEELKGDNITGPKLKNEVVKATSCSEEEHHLFISQAELQMHRTRTPWWANPEIYFHSMVKEATIMAEDVSGGEIEIERIPTRLIEARSKGLVPIDYLQTPKFQQTRTSARDRKTKEQLLHHSTGMSENGRISASSFLGSPDCITNCNGIQGSEWDHHLIVTENI 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1179 917 SUPERFAMILY WD40 repeat-like 168 556 IPR036322 GO:0005515
Glsi14g1179 917 PANTHER BREAST CARCINOMA AMPLIFIED SEQUENCE 3 97 888 IPR045142 GO:0006914
Glsi14g1179 917 Gene3D - 165 575 IPR015943 GO:0005515
Glsi14g1179 917 FunFam Breast carcinoma-amplified sequence 3 375 606 - -
Glsi14g1179 917 Pfam Breast carcinoma amplified sequence 3 606 846 IPR022175 -
Glsi14g1179 917 SMART WD40_4 513 554 IPR001680 GO:0005515
Glsi14g1179 917 SMART WD40_4 456 496 IPR001680 GO:0005515
Glsi14g1179 917 SMART WD40_4 274 309 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1179 Glsi-ChrGlsi14 12933480 12943464 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1179 14 12933480 12943464 Glsi04g0936 04 7461072 7467226 CCT
Glsi14g1179 14 12933480 12943464 Glsi14g1179 14 12933480 12943464 ECH