Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi14g1177 ATGCAGCTGCAAATATCACCAAGTTTAAGGCATGTGACTGTGCTTCCAGGGAAAGGGTTGAAAGAGTTTATCAAAGTGAACGTTGCATCAAGGCGAGTTTCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTTCTTGTTCGGTTTGCGTTTGTATTGACTGCAGTGGATAGCATTGATGGTGAAAACAAGTGCTCTACCATAGGTTGCCTGGGAAAAAAACTAGGACCAAGGATTCTGGGAAGAAAGCTTGAATCAACTGTCCCAGAAGTAATATACCGAATTTTAGATGAACCCATTGGCAAAGATGAACTGCAGGGAAGATCTGATATTCCACAGACTTTAGAAGAGTTCATGACTGAGATGAATGAAGGTGGATATGATGCCAAAACATTTGCTGTTAAACTCCGAGAAATGGTCACCCTCATGGAACAAAGGACGAGGACAGCCAAAATCCAAGAATACTTATATCGTCATGTAGCATCAAGCAGCATACCCAAACAGCTTCACTGCCTTGACTTGAGGCTGGCCAATGAGCACACCAACAATGCAGCAGCTCGCCTTCAGCTCCCTTCTGCAGAGCTCGTACCTGCCCTGGTTGACAACAACTACTTCCACTTTGTCCTCGCCTCAGACAATGTTCTGGCTGCCTCTGTGGTTGCAACATCCCTTGTACGCAATTCCTTGCGGCCCCAGAAAGTTGTTCTGCACATCATTACAGATAGAAAGACTTATTATCCCATGCAGGCTTGGTTCTCATTGCACCCTCTATCACCTGCTATAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTAACAAAGGGAAAGGTGCCTGTACTTGAAGCAATGGAAAAAGATCAAAAAGTGCGGTCACAATTTAGAGGGGGATCATCAGCTATTGTTGCAAATTCGACTGAGAAGCCTAATGTTATTGCTTCAAAACTGCAAGCACTTAGTCCCAAATATAATTCAGTGATGAACCACATTCGAATACAACTTCCAGAGTTGTTCCCAAGTCTAAACAAGGTGGTCTTCCTGGATGATGACATTGTGGTACAAACTGATCTTTCACCTCTGTGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTGGAAACATGTAGCGGAGAAGATAAGTTTGTGATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCCCACCCTCTAATTTCCAAGAATTTCGATCCCAATGAATGTGCTTGGGCTTATGGCATGAACATTTTTGATCTGGAGGCTTGGAGGAAGACCAATATAAGCTTTACATATCATTATTGGGTTGAGCAGAATATAAGATCGGACCTGAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTAATAGCTTTCCATGGTCATGTGCACATCATTGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAAAATACAAGTTTTGCTGATGCTGAGAGTGCTGGTGTCATCCATTTTAACGGTAGGGCAAAGCCTTGGCTAGACATAGCTTTTGCACAACTAAGGCCACTGTGGGTTAAGTATGTTGACTTTTCAGATAAGTTCATCAAGAGCTGTCACATAAGAAAATCATAG 1602 0.4288 MQLQISPSLRHVTVLPGKGLKEFIKVNVASRRVSYRMLFYSLLFFTFLVRFAFVLTAVDSIDGENKCSTIGCLGKKLGPRILGRKLESTVPEVIYRILDEPIGKDELQGRSDIPQTLEEFMTEMNEGGYDAKTFAVKLREMVTLMEQRTRTAKIQEYLYRHVASSSIPKQLHCLDLRLANEHTNNAAARLQLPSAELVPALVDNNYFHFVLASDNVLAASVVATSLVRNSLRPQKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWLTKGKVPVLEAMEKDQKVRSQFRGGSSAIVANSTEKPNVIASKLQALSPKYNSVMNHIRIQLPELFPSLNKVVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCSGEDKFVMSKRLKSYLNFSHPLISKNFDPNECAWAYGMNIFDLEAWRKTNISFTYHYWVEQNIRSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTSFADAESAGVIHFNGRAKPWLDIAFAQLRPLWVKYVDFSDKFIKSCHIRKS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi14g1177 533 CDD GT8_like_1 207 519 - -
Glsi14g1177 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 527 IPR029044 -
Glsi14g1177 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 86 530 IPR029993 GO:0047262
Glsi14g1177 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
Glsi14g1177 533 Pfam Glycosyl transferase family 8 203 506 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi14g1177 Glsi-ChrGlsi14 12927766 12930885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi14g1177 1 533 Glycosyltransferase AT5G54690 79.252 0.0 881
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1177 14 12927766 12930885 Glsi04g0934 04 7431939 7434950 CCT
Glsi14g1177 14 12927766 12930885 Glsi14g1177 14 12927766 12930885 ECH