Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1324 ATGGCAAAACTTACAACTTGGTTCTCTCTGAGGCACTTCTTGGTGTTGTCGCTCGCTTTGAATATGAGTTTGATACTGAGAATAGTGTATGAAAGTGAAGAAGGCCACAGAGGTTCTTGTTTGGCAGACGCCGATTCTAACAGAGCGGGACATGTTATCCACAAGTCACGTTTGGCTATATCCTCTTCGTCTTCATCTTCTACTAATTCTACTCGCACAAACCATCCACAAGGCAAGGACAGAGTAATCAATCTCGACCATGGAGATCCGACAGCGTATGAAAGATATTGGCGACAAATGGGTGAGAAGACGACGATAACAATACGGGGTTGGCAATCGATAAGCTATTTTTCTGATGTGAGCAACATTTGCTGGTTTCTGGAGCCAGAGTTTGCGAAGGAGGTGGTGAGGGTGCACCAAGTGGTTGGCAATGCAGTCACAGAAGGTTATCATATTGTAGTAGGGACGGGTTCCTCTCAACTCTTTCTGGCTGCTCTTTATGCTCTGTCTCCACGTGATGCACCTGAACCAATCAGTGTCGTGTCTGCCGCACCATTCTACTCGTCGTACCCATCAATGACTGATTACCAGAAATCAGGGCTTTACAAATGGGGTGGTGATGCACAGAGTTTCGACAAGGACGCTCCCTACATTGAGCTCGTTACTTCTCCCAACAACCCTGATGGTTATGTCAGGCGATCCGTGGTTAACCGTAGCCAGGGACTGTTGGTTCACGACCTTGCCTATTATTGGCCACAATACACTCCTATTTCATCCCCGGCAGATCACGACCTAACGCTCTTCACTGTCTCCAAAAGCACTGGCCATGCTGGAATGCGCATAGGTTGGGCTCTTGTGAAGGACAAAGAGGTAGCAAAGAAAATGACAGAGTTTATAATGCTGAATACAATAGGCGTGTCAAAGGACTCGCAGCTGAGGGCTGCTAAGGTTTTAAGGGCGGTGTCTGAGAGCAGCGAAGGAAGCTTCCAAGATGGCGAAGCATTCTTCAAGTTCAGCTACAATATGATGGCAGAGAGGTGGAAGCAACTGAGAGAAGCAGTTGAGCGCAGTGGAATGTTCAGTTTACCCAACTTTTCTCCCGCATTCTGCACATTTTTCCGTCAGGTGACGGAGCCTCAACCTGCTTTTGTGTGGTTAAAGTGTGAGGGAGATATAGAAGACTGTGAAAGTTTCCTTAGAGGACACAACATCTTAACTCGGAGTGGGAGGCAGTTTGGGGTCAGCCCAAAATATGTAAGAATTAGCATGTTGGACACGGATGAAAACTACATCCAGTTTTTAGATAGATTGTCTTCCATACAGTCATGA 1329 0.4673 MAKLTTWFSLRHFLVLSLALNMSLILRIVYESEEGHRGSCLADADSNRAGHVIHKSRLAISSSSSSSTNSTRTNHPQGKDRVINLDHGDPTAYERYWRQMGEKTTITIRGWQSISYFSDVSNICWFLEPEFAKEVVRVHQVVGNAVTEGYHIVVGTGSSQLFLAALYALSPRDAPEPISVVSAAPFYSSYPSMTDYQKSGLYKWGGDAQSFDKDAPYIELVTSPNNPDGYVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHDLTLFTVSKSTGHAGMRIGWALVKDKEVAKKMTEFIMLNTIGVSKDSQLRAAKVLRAVSESSEGSFQDGEAFFKFSYNMMAERWKQLREAVERSGMFSLPNFSPAFCTFFRQVTEPQPAFVWLKCEGDIEDCESFLRGHNILTRSGRQFGVSPKYVRISMLDTDENYIQFLDRLSSIQS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1324 442 CDD AAT_like 129 437 - -
Glsi13g1324 442 Gene3D - 38 123 IPR037029 GO:0016846
Glsi13g1324 442 Gene3D Aspartate Aminotransferase, domain 1 327 442 IPR015422 GO:0003824
Glsi13g1324 442 MobiDBLite consensus disorder prediction 59 78 - -
Glsi13g1324 442 MobiDBLite consensus disorder prediction 59 84 - -
Glsi13g1324 442 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 79 439 - -
Glsi13g1324 442 SUPERFAMILY PLP-dependent transferases 76 439 IPR015424 -
Glsi13g1324 442 Gene3D - 128 326 IPR015421 GO:0003824
Glsi13g1324 442 Pfam Allinase 83 440 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1324 Glsi-ChrGlsi13 30618702 30622914 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0663 02 4304748 4308919 Glsi13g1324 13 30618702 30622914 CCT
Glsi13g1324 13 30618702 30622914 Glsi13g1324 13 30618702 30622914 ECH