Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0663 ATGGCCAAGCTTCCAACTATGCTCTCTGTGTGGCACTTCCTGGTGTTGTCGCTGGCTTTGAATGTGAGTTTGATACTGAGAATGGTGTATGAAAGTAAAGGAGGCTTCAAAGGATCTTGCTTGAAGAAACAGAGGGGGACGTCAATGGCAGATGCTGATTCCCACAGAGATGGGCCTGTTTTCCACAAGGCATGTTTGGCTAATTCTACTCGTACAAATCATCCAGAAGGCAGGGAAAGAGTAATCAATCTCGACCACGGAGATCCGACAGTGTATGAAACATTTTGGCGGCAAATGGGTGACAAGACCACTATTACAATCCCAGGATGGCAATCCATGAGCTATTTTTCCGATGCCACCAACATTTGCTGGTTCCTGGAGCCTGAGTTTGCAAAGGAGGTGGTGAGGCTCCACAATGTGGTCGGCAATGCTGTCGCAGAAGGTCGCCATATTGTTGTCGGGACAGGTTCCTCTCAGCTCTTTCTGGCTGCTCTTTATGCTCTGTCTCCGCGTGATGCTCCTGAACCAATTAGCGTGGTATCTGCCGCACCGTATTACTCGTCCTACCCATCAATGACTGATTACCAAAAATCAGGCCTCTACAAATGGGCTGGTGATGCGGAGAGTTTTGATAAAGATGGACCTTACATTGAGCTTGTTACTTCCCCCAACAATCCCGATGGTTATGTCAGGCGCTCTGTGGTCAACCGAAGCCAGGGTTTATTGGTTCATGACCTTGCCTATTATTGGCCACAATATACCCCAATCTCATCCCCTGCTGATCATGAGCTAACCCTATTCACTGTCTCAAAAAGCACTGGCCATGCAGGAATGCGAATTGGGTGGGCTCTGGTGAAAGACCAAGAGGTAGCAAAGAAAATGACTAAATTCATAGAGCTCAATACCATAGGTGTCTCAAAGGATTCGCAGCTCAGGGCTGCTAAGGTTTTAAGGGCAGTGTCTGACAGCTGCGAGCAAGAAAAAAGCTCCCAAGAGGGTGAGTCATTCTTTAAGTTCAGCTACAATCTTATGGCTCAGAGGTGGAAGCAACTGAGAGCCGTAGTTGACCGTAGTGGAATGTTCAGTTTGCCCAACTTTTCTCCTGCTTTTTGCACCTTCTTCGCTCAGGTTTTGGAGCCTCAACCTGCTTTTGTGTGGTTAAAGTGTGAGGGAGATATAGAGGACTGTGAAAGTTTCCTTCGAGGATACAAGATCTTAACAAGAGGTGGGAAGCACTTTGGGGTTAGCCCCAAATATGTAAGAATTAGCATGTTGGACACAGACGAAAATTTCGTTCAGTTTTTAGATAGATTGTCTGCCGTACAGTCATGA 1332 0.4685 MAKLPTMLSVWHFLVLSLALNVSLILRMVYESKGGFKGSCLKKQRGTSMADADSHRDGPVFHKACLANSTRTNHPEGRERVINLDHGDPTVYETFWRQMGDKTTITIPGWQSMSYFSDATNICWFLEPEFAKEVVRLHNVVGNAVAEGRHIVVGTGSSQLFLAALYALSPRDAPEPISVVSAAPYYSSYPSMTDYQKSGLYKWAGDAESFDKDGPYIELVTSPNNPDGYVRRSVVNRSQGLLVHDLAYYWPQYTPISSPADHELTLFTVSKSTGHAGMRIGWALVKDQEVAKKMTKFIELNTIGVSKDSQLRAAKVLRAVSDSCEQEKSSQEGESFFKFSYNLMAQRWKQLRAVVDRSGMFSLPNFSPAFCTFFAQVLEPQPAFVWLKCEGDIEDCESFLRGYKILTRGGKHFGVSPKYVRISMLDTDENFVQFLDRLSAVQS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0663 443 Gene3D - 39 122 IPR037029 GO:0016846
Glsi02g0663 443 CDD AAT_like 128 438 - -
Glsi02g0663 443 Gene3D Aspartate Aminotransferase, domain 1 334 442 IPR015422 GO:0003824
Glsi02g0663 443 Gene3D - 127 330 IPR015421 GO:0003824
Glsi02g0663 443 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 99 440 - -
Glsi02g0663 443 SUPERFAMILY PLP-dependent transferases 74 439 IPR015424 -
Glsi02g0663 443 Pfam Allinase 82 440 IPR006948 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0663 Glsi-ChrGlsi02 4304748 4308919 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0663 02 4304748 4308919 Glsi13g1324 13 30618702 30622914 CCT
Glsi02g0663 02 4304748 4308919 Glsi02g0663 02 4304748 4308919 ECH