Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1318 ATGACACTCCAAATGTTAGGTGCAACTCTGGTGCTGAATTTTGGATATAGTGAAAATGGAAAGCTTGTAATTCAGCTTGCTACAGAGCGAAAACTTCAGACCATAAACATAATTGATGATAAGCCAGGAACCCCTGATATTATTGAAGACCTAAAGGCGCTTGGTGGAGATTTTCTCATTCCAGAAAGTTATAGAAGGACCTGTCGGGTTCCTGCTAGCATTGAGCCCTGCCCTTCAGCAGGTTTGAATTTCAGGGATGGATCAATGAAGTGTGGAAAAGAGGCTCCAAGAACAGGCTTTAGGATACAAGCAAGCATCTTTGAGAACGTGAAAGACTTTAGCTTACTGTATTTCGTTGACCTCGATGGATCCGGAGGGTGTTGCTCCAATTGTCTATTTGCAAAGCGGCAACATAAGCAGCGCCTTGTTCTCCGTAGAATCGCCACCAGCTCAGCTGATTTGGGATATGTGGAGAAAGCTCAACCAATGAGCAATAGAGAGGAAGGGATTATGGATGGAATAGAAGTGAAAACTAATTCAAAACTCTTTTTAAGTCTCTGCGGGTCAAATAAACTTGGTTTCTTCTTGGTAGCTCTTGTGTTTTGTATGGACATGAAGGGACATTCAGTTTTCTGCACAACTCGTAGGAATGAACCATTTGCTGCAGCTCCCCACACAAGAAGACAACTCCAATGCATACAAGAAAATGATGTTGCCCCAGAACAAACAAGTCCACAACAAAATCATTCTCTGAAATTGGCTGCTTCTACTTCTACTTCCCAAAATACTCTATCTATGCTACCTGCTTTTGTTGCTTTGCTTCTGCTTCTTACTTCTATTAGCCCAGTTCTGTCTCATCCCATTGTCTCAGATTCAACCAACCAGACTTTTAGATCAGCTCACGAGTTGCTCAAGTTCAGGAGAATCAGAGATCACCTAAGTAGAATCAACAAACCTGCTGTCAAGACAATTAAGAGCCCAGATGGGGATTTGATAGATTGTGTTTTATCGCATCAGCAACCAGCTTTTGACCATCCTGAGCTCAAAGGGAAGACACCATTGGATCCACCAGAAAGGCCAAAGGGCAACGGCAATGGGGAAAAGGTAATAGAGAGCTTTCAGCTATGGACTGATTCTGGTGAATCATGCCCAGAAGGAACTGTTCCTATCAGAAGAACAACAGAGGAAGACATTCTAAGAGCAAGTTCCATCGGCAGATTTGGAAGAAAACCAAGACACGTACGAAGAGACTCAAGTGGCAGTGGTCATGAGCACGCAGTTGTTTTTGTAAATGGAGAGCAATATTATGGAGCAAAGGCAAGCATCAACGTGTGGGCACCCCGTGTAACCGATCAATACGAATTCAGCTTGTCACAAATATGGGTTATTGCCGGCTCCTTTGGTAATGATCTGAATACCATAGAAGCTGGTTGGCAGGTGAGCCCAGAGCTATACGGTGACAACTATCCTAGGTTCTTCACTTATTGGACAACAGATGCATATCAAGCCACTGGATGCTACAACTTACTCTGTTCAGGTTTTGTCCAAACTAACAACAGAATATCAATAGGGGCAGCCATCTCCCCAAGATCAGCCTATAACTCCAGGCAATTTGATATTGGCTTAATGGTTTGGAAGGATCCAAGACATGGCCATTGGTGGCTTGAGTTCGGGTCGGGTCTACTCGTTGGGTACTGGCCAGCTTACTTGTTTAGTCACTTGAGAAGCCATGCGAGCATGGTGCAATTTGGAGGAGAAATTGTGAACTCTCGTTCAAGGGGCTATCACACAGGCACTCAAATGGGAAGTGGCCATTTTGCAGGAGAAGGGTTTAAAAAAGCAGCTTATTTCAGAAACTTGCAAGTTGTTGATTGGGACAATAACTTGCTCCCTCTAACGAATATTCACCAGTTAGCTGATCATTCCAATTGCTATGACATAAGACAGGGCAGAAACAATGTATGGGGAACTTACTTTTATTATGGAGGCCCAGGAAGGAATGTGAGATGCCCCTGA 2016 0.4375 MTLQMLGATLVLNFGYSENGKLVIQLATERKLQTINIIDDKPGTPDIIEDLKALGGDFLIPESYRRTCRVPASIEPCPSAGLNFRDGSMKCGKEAPRTGFRIQASIFENVKDFSLLYFVDLDGSGGCCSNCLFAKRQHKQRLVLRRIATSSADLGYVEKAQPMSNREEGIMDGIEVKTNSKLFLSLCGSNKLGFFLVALVFCMDMKGHSVFCTTRRNEPFAAAPHTRRQLQCIQENDVAPEQTSPQQNHSLKLAASTSTSQNTLSMLPAFVALLLLLTSISPVLSHPIVSDSTNQTFRSAHELLKFRRIRDHLSRINKPAVKTIKSPDGDLIDCVLSHQQPAFDHPELKGKTPLDPPERPKGNGNGEKVIESFQLWTDSGESCPEGTVPIRRTTEEDILRASSIGRFGRKPRHVRRDSSGSGHEHAVVFVNGEQYYGAKASINVWAPRVTDQYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNYPRFFTYWTTDAYQATGCYNLLCSGFVQTNNRISIGAAISPRSAYNSRQFDIGLMVWKDPRHGHWWLEFGSGLLVGYWPAYLFSHLRSHASMVQFGGEIVNSRSRGYHTGTQMGSGHFAGEGFKKAAYFRNLQVVDWDNNLLPLTNIHQLADHSNCYDIRQGRNNVWGTYFYYGGPGRNVRCP 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1318 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 71 IPR036291 -
Glsi13g1318 671 Gene3D - 445 557 - -
Glsi13g1318 671 MobiDBLite consensus disorder prediction 342 366 - -
Glsi13g1318 671 Pfam Neprosin 453 664 IPR004314 -
Glsi13g1318 671 MobiDBLite consensus disorder prediction 344 365 - -
Glsi13g1318 671 Pfam Neprosin activation peptide 323 428 IPR025521 -
Glsi13g1318 671 FunFam Putative carboxyl-terminal proteinase 444 563 - -
Glsi13g1318 671 Gene3D - 7 74 - -
Glsi13g1318 671 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 309 667 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1318 Glsi-ChrGlsi13 30538363 30548278 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0673 02 4383743 4386759 Glsi13g1318 13 30538363 30548278 CCT
Glsi02g0673 02 4383743 4386759 Glsi13g1318 13 30538363 30548278 ECH
Glsi13g1318 13 30538363 30548278 Glsi13g1318 13 30538363 30548278 ECH