Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0673 ATGGACATGAAGGGATATTCAGTTTCCTGGACAAATCACGGGGATGAACCATTTTTTGCAGCTCACCATCACGCAACAAGACAATACCATGTTGTCTCAGAACAAACAACACCACAAAATCATTCTCCGAAATTGGCTGCTCCTACTTCCCAAAATACTCTACCTATTCTACCTGCTTTTGTTGCCTTTCTCCTGCTTCTAACTTCAATTAGCCCGGTCTTGTCTATCCCTCTTGTCTCAGATTCCGGTCACCCCCTACCGCTCAATCACACTATTAAACCAGAAGTAGAGTTACTCAAATTGAGGAGAATCAAAGTTCTTCTAAGGAAGATCAACAAGCCTCCTGTCAAGACAATTAAGAGCCCAGATGGTGATTTGATTGATTGTGTTTTATTTCATCAGCAGCCAGCTTTTGACCATCCTGAGCTCAAAGGGCAGAGACAATTGGTTCCACCGGAAAGGCCAAAAGGCTATGGGAATGGAGAAACGGTTGTAGAAAGCTTTCAGCAATGGTCTGATTCTGGTGAATCATGCCCAGAAGGAACAGTTCCAGTCAGAAGAACAACAGAGGAAGATATTCTAAGATCAAGTTCCATCCAAAGATTTGGAACAAAGCCAAGACGTGTACGGAGAGACTCAACTGCTAGTGGTCATGAGCATGCAGTTGTTTTTGTAAATGGAGATCAATTTTATGGGGCAAAGGCAAGCATAAACGTATGGGCGCCCCAAGTAACGGATCAATACGAATTTAGCTTGTCACAAATATGGGTTATTGCTGGCTCCTTTGGTAATGATCTGAATACCATAGAAGCTGGTTGGCAGGTGAGCCCAGAGCTATATGGAGACAACCATCCAAGGTTCTTCACTTATTGGACAACAGATGCATATCGAGCCACTGGATGCTACAACTTGCTCTGTTCGGGCTTTGTCCAAACAAACAATAAGATAGCAATAGGGGCAGCAATCTCCCCAAGATCCGTCTATAACGGCAGACAATTTGACATTGGCTTAATGATTTGGAAGGATCCAAAGCATGGGCATTGGTGGCTGCAGTTCGGGTCGGGTCTACCGGTGGGGTACTGGCCAGCATACTTATTTAGTCACTTGAGAAGTCAAGCGAGCATGGTGCAATTTGGAGGAGAGGTAGTGAACTCTGGTTCAAAGGGCTACCACACGGGCACTCAAATGGGTAGTGGCCATTTTGCAGGAGAAGGATTTAGAAAAGCAGCGTATTTCAGGAACTTACAAGTAGTTGATTGGGACAACAGCTTGCTTCCGCTGACCAATATTCATCAGTTGGCCGATCATTCCAATTGCTATGACATAAGACTGGGCACAAATAATGTTTGGGGAACTTACTTTTATTACGGGGGCCCTGGAAGGAATGTGAGATGCCCATGA 1401 0.4468 MDMKGYSVSWTNHGDEPFFAAHHHATRQYHVVSEQTTPQNHSPKLAAPTSQNTLPILPAFVAFLLLLTSISPVLSIPLVSDSGHPLPLNHTIKPEVELLKLRRIKVLLRKINKPPVKTIKSPDGDLIDCVLFHQQPAFDHPELKGQRQLVPPERPKGYGNGETVVESFQQWSDSGESCPEGTVPVRRTTEEDILRSSSIQRFGTKPRRVRRDSTASGHEHAVVFVNGDQFYGAKASINVWAPQVTDQYEFSLSQIWVIAGSFGNDLNTIEAGWQVSPELYGDNHPRFFTYWTTDAYRATGCYNLLCSGFVQTNNKIAIGAAISPRSVYNGRQFDIGLMIWKDPKHGHWWLQFGSGLPVGYWPAYLFSHLRSQASMVQFGGEVVNSGSKGYHTGTQMGSGHFAGEGFRKAAYFRNLQVVDWDNSLLPLTNIHQLADHSNCYDIRLGTNNVWGTYFYYGGPGRNVRCP 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0673 466 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 104 462 - -
Glsi02g0673 466 Pfam Neprosin activation peptide 118 223 IPR025521 -
Glsi02g0673 466 FunFam Putative carboxyl-terminal proteinase 239 358 - -
Glsi02g0673 466 Gene3D - 241 353 - -
Glsi02g0673 466 Pfam Neprosin 248 459 IPR004314 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0673 Glsi-ChrGlsi02 4383743 4386759 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0673 02 4383743 4386759 Glsi13g1318 13 30538363 30548278 CCT
Glsi02g0673 02 4383743 4386759 Glsi13g1318 13 30538363 30548278 ECH
Glsi02g0673 02 4383743 4386759 Glsi02g0673 02 4383743 4386759 ECH