Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi13g1290 ATGGAGGTAGAAAATTGTCAAAATGGGTGTACTCGATGGTTGAAAGATGATGAGATTGCGATTTCAGCTTCGAACAAATCCATTAGGCAAGAGTCAGGCAATCACTCAGATCATATGAAGGTTGAGATTTCTGTCTGGGAGACCACGGGCAACCAAGAATCAACGATTTCTGATTGCGAAAGTAGTATTTCCGGACGCAATTATGTGCAACACCATCTGTTCGGTGAAGGTTTTGATAGACTCGCTGAAGGTGACAGGGTTCACGACCTCATTCGGAAAAGATTCATTCGGGGTTTGGTTACGCTTGGGACGCAAACGGAGGTTGTCGCAATTCATAGAAATGCTTGTTCTAGCGTTATGGCGCGAGCTCGGATTCAATCATTTCAGGTTTATATGCGAGCAGAGGAAAAGAAGCTTCACGGTAATGCCAATGTGAAGTATGCATGGTACGGGACTTCCGGTAAGGAAGAGATAGGAGAGATAATTTCACACGGGTTTGGTCATGGTGGTAAATCTCAGAATAATGGACTCTTTGGTTGCGGAATTTATCTATCTCCAGATAAGTTTCCTCTGGAAAGTGTGAAAGGCTCTATTGTTGACAAAGACGGCCTAAGGCACTTGTTACTGTGTCGCGTTATTTTGGGGAGGCCGGAGCTTGTGCATCCCGGTTCCGAGCAATGCCATCCGAGTTCTGAAGAATTTGATTCAGGGGTCGACAGTTTTTCAGCTCCCGAGAAGTACATTATTTGGTGTACCCGTATGAACACTCACATTTTGCCTGAATATATTATAAGTTTCAAAGTTCCTTCCATGAAAGGGCTTGTGATGTTTGAAGAAACTTTGAGAAAACCATCTTCACCTTGGATGCCATTTCCAACACTAATTCCTGTGCTTTCTAAGTTTTTGCCTCCACCTGCTATTGTCTTGATCTCCAAGTGCCACAAAGATCACAAAGAAAAGAAGATTTCACGACATGAACTAATACAAAAAGTGAGACAAATAGCAGGAGACAAATTGTTGATTGCCGTCATTAAATCTTTCAGAGCCAAGGTACGAACAATCTCTCTCAGGTGGTTTTGA 1080 0.4296 MEVENCQNGCTRWLKDDEIAISASNKSIRQESGNHSDHMKVEISVWETTGNQESTISDCESSISGRNYVQHHLFGEGFDRLAEGDRVHDLIRKRFIRGLVTLGTQTEVVAIHRNACSSVMARARIQSFQVYMRAEEKKLHGNANVKYAWYGTSGKEEIGEIISHGFGHGGKSQNNGLFGCGIYLSPDKFPLESVKGSIVDKDGLRHLLLCRVILGRPELVHPGSEQCHPSSEEFDSGVDSFSAPEKYIIWCTRMNTHILPEYIISFKVPSMKGLVMFEETLRKPSSPWMPFPTLIPVLSKFLPPPAIVLISKCHKDHKEKKISRHELIQKVRQIAGDKLLIAVIKSFRAKVRTISLRWF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi13g1290 359 ProSiteProfiles PARP catalytic domain profile. 62 286 IPR012317 GO:0003950
Glsi13g1290 359 ProSiteProfiles RST domain profile. 282 353 IPR022003 -
Glsi13g1290 359 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 68 349 IPR044964 -
Glsi13g1290 359 Pfam RCD1-SRO-TAF4 (RST) plant domain 283 348 IPR022003 -
Glsi13g1290 359 SUPERFAMILY ADP-ribosylation 107 268 - -
Glsi13g1290 359 Gene3D - 78 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi13g1290 Glsi-ChrGlsi13 30246381 30247827 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0705 02 4613161 4617328 Glsi13g1290 13 30246381 30247827 CCT
Glsi13g1290 13 30246381 30247827 Glsi13g1290 13 30246381 30247827 ECH