Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0705 ATGGCCACCCAGAAAGGAGGCTTCGACAGTGTCCCGTGCGATGAGAAAGGAGACTTCGACGGTGTTCTAAATTCTGCAAATCTGGAGCGCTCTTATGTTGTGGACTGTGTGTATGCTTCTGCTACGGGGAATCTCTTTTGCATTAGAGGATCTTCAATAATTAAGAGAAATCCATTAGTGCTTGGGATTCTTCATTCCTCTACCCATTCTAGTTCTCCAGATTTGTGGATATGGAGCTTGGACTCTTCAATATTGGATGCTGTATGTTACGTAAAAGAAAATCCCTATTCCCTTTCATTTATTCGATATAAAACCTGCGCCACAACTTCTGAGCATTTTGTTTCTGAAATTTCTGGGTCTGAGGGAAGTTGTAATTATTTCATTCCTTTGTTCATCATGGAACGAATAATCCTTCATAATTGGTCTGTACCAAAGGTGGAACTGGATGAGATTGAAAGTGGATTTGGGTCTTCAGCTCCGAATAATTCAATTAAGAAAGAGTCAGGTGATCAATCAAATCATATTGAGAGCTCGGTCTGGGACACCGCTAGCAACGAAGATTCTGCGGTTTCCGATTGCGAAAGTGGTGTTTCCGGATCTAATTATGCGCAACATCGTCTGTTCGGTGAAGGGTTTATTAGACTCGTAGAAGATGACAGGGTTCATGACCTCATCCAGAGACGATTCATTATGGGTTTGGGCTTGCTTGGGGCGCAAACGGAAGTCGTCGCAATTCATAGAAATGCTTGTTCTAGCTTAACGGCTCAAGCGCGGGTTCAATCATTTCAGGTTTATATGCGAGCGGTAGAAAAGATGCGTAATGGTAATGCCAATGTGAAGTATGCTTGGTATGGGACTTCTGGTAGGGAAGAGGTAGGAGAGATCACTTCACACGGTTTTGGTCATGGTTGGAAATCTCGGAATAATGGACTCTATGGTTGTGGACTATATCTCTCCCCAGATGATTCTCCTCTGGAAAGTGTGAAAAGCTCGGTGGTTGACAAAGACGGTCTAAGGCACTTGTTTCTTTGTCGTGTTATTTTGGGGAGAACAGAGCTTGTCCATCCTGGTTCTGAGCAATGTCATCCGAGTTCTGAGGATTATGATTCAGGGGTTGACAGTCTTTCAGCTCCTAAGAAGTACGTTGTTTGGTGTACTCAGATGAACACCCATATCTTGCCGGAATATGTTATAAGTTTCAGACTGACTTCCTTGAAAGGGTGTGAGAAGCTTGAAGAACCGTTGGGAAGACCATCTTCCCCTTGGATGCCATTTCCGACTCTTATTTCTGTGCTTTCGAAGTTTTTGTCTCCGCCTGCTATTGCCCTGATATCTAAGTACCATAAAGATCACAGAGAAAAGAAGATTTCACGACATGAATTGATACATAAAGTGAGACAAACTGCAGGAGACAAGTTGTTGATTGCAGTGATCAAATCTTTCAGAGCCAAGGTTGAATTTGTTTTTGGCCTCCAGAAAACACCTGGAAGTGTTCAGCAAAGAAGGTCAAAGAACGATGGCAAGGCAGTTGGCAACATAAATGAGATGATGTCCTTCATCTGA 1563 0.4306 MATQKGGFDSVPCDEKGDFDGVLNSANLERSYVVDCVYASATGNLFCIRGSSIIKRNPLVLGILHSSTHSSSPDLWIWSLDSSILDAVCYVKENPYSLSFIRYKTCATTSEHFVSEISGSEGSCNYFIPLFIMERIILHNWSVPKVELDEIESGFGSSAPNNSIKKESGDQSNHIESSVWDTASNEDSAVSDCESGVSGSNYAQHRLFGEGFIRLVEDDRVHDLIQRRFIMGLGLLGAQTEVVAIHRNACSSLTAQARVQSFQVYMRAVEKMRNGNANVKYAWYGTSGREEVGEITSHGFGHGWKSRNNGLYGCGLYLSPDDSPLESVKSSVVDKDGLRHLFLCRVILGRTELVHPGSEQCHPSSEDYDSGVDSLSAPKKYVVWCTQMNTHILPEYVISFRLTSLKGCEKLEEPLGRPSSPWMPFPTLISVLSKFLSPPAIALISKYHKDHREKKISRHELIHKVRQTAGDKLLIAVIKSFRAKVEFVFGLQKTPGSVQQRRSKNDGKAVGNINEMMSFI 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0705 520 Pfam RCD1-SRO-TAF4 (RST) plant domain 417 482 IPR022003 -
Glsi02g0705 520 Gene3D - 212 401 - -
Glsi02g0705 520 SUPERFAMILY ADP-ribosylation 215 401 - -
Glsi02g0705 520 ProSiteProfiles PARP catalytic domain profile. 199 426 IPR012317 GO:0003950
Glsi02g0705 520 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 159 483 IPR044964 -
Glsi02g0705 520 ProSiteProfiles RST domain profile. 416 487 IPR022003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0705 Glsi-ChrGlsi02 4613161 4617328 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0705 02 4613161 4617328 Glsi13g1290 13 30246381 30247827 CCT