Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1314 ATGTTTGGCAATTCAATCACTATGTCACTTACAACCATGTATTTGATCGCTAACTTGATGGGACTGACGGTCACCTTTTATCCATTGGTGACGGGCTTTGCTTTTGATCTCAATCAAAATCCTTTTGAACTATTTCTAATGGCAATATCCTTTTTCAAGATTTCTCTTGAATGGCCTGTTCAATTAGTCAATCGTCATTCTTCAGTTGCAAGTACTTTGTGGGTTTTAATATCCGTGATATTTAAGTACTCCAAAATGTCTAAACCCCAAAATGATCCGCTTCTGCAAGTTGAAACAACATGTGGATCACTTCTGTTTGAACTTCAGATAATATGGGATGAAGTTGGGGAGTCTGAGACTGAAAGAGATAAAATGTTGCTTGAGCTCGAACGGGAGTGTCTAGAGGTGTACAGAAGAAAGGTAGATCAGGCAAATCGGAGTAGAGCTCAATTAAGACAGGCAATTGCTGATTCTGAAGCAGAACTTGCTGCCATCTGTTCAGCAATGGGAGAGCGACCAGTACATATTAGGCAGTCTGATCAAAAGACTGGAAGCTTGAAAGAAGAGCTTGGCAGAATTGTTCCAGAGCTTGAGGAGATGCGGAAAAGGAAGTCTGACAGAAGAAATCAATTTATAGAAGTCCAAGAGCAGATACTAAATATCTCAAATGAGATCTTCGGGTCCAGAGAGTTTATTTCAGCCAAAACAGTTGTAGATGAATCTGATTTGTCCTTGAGAAGGCTTGAAGAATTGCACAGAGAGCTGCAGGCACTTCAAAAAGAGAAGAGTGATCGCCTCAAGATAGTCCAGGATCACCTTTACACTTTAAATTCTCTTTGTTCAGTGCTTGGTTTGGACTTTAAGCAGATAGTCAGTGAAGTTCATCCTAGTTTAGGAGATACTGAAGGACCTAAGAGTGTTACTAATGATACAATCCAGCAATTGGCGGCTTCTACACAAAAACTGCGGGAAGTTAAATTGCAGAGAATGCAGAAGCTCCAAGATCTCGCAACAACAATGTTGGAGCTCTGGAACTTGATGGATACACCAATCGAAGAACAACAGATGTTTCAGACTGTTACTTGTAATGTAGCTGCTTCAGAACATGAAATTACTGAGCCTAACACCTTGTCTGTGGATTTCATTAGTTATGTTGAGGCGGAAGTATCTAGGTTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGAACAGAGCTAGAGGAGATTTGCCGAAAGATGCATTTGGTTCCAGAAGTAGATAATGCAGTGGAATATGCTGTTGAAGCTATAGAGTCAGGATCTGTAGACCCTGCTTGTGTTCTTGAACAATTTGAACTTCAGATTGCCAAGGTCAAGGAGGAAGCTTTTAGTAGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTGGCAGCATGTGATGAGGAATCTTGGCTTGAGGAGTACAACAGGGATGACAATCGGTATAATGCTGGGAGAGGTGCTCACCTTACTCTCAAGCGAGCTGAGAAAGCTCGTGCCTTGGTTAATAAAATTCCAGCAATGGTAGATGCTTTAACTTCAAAAATTGTTGCATGGGAAAAGGACAAAGGCATTGAGTTCACATATGACGGTATCCGTCTGCTCTCTATGCTTGAGGAGTACAACATATTACGGGAAGAAAAAGAGCAAGAACGTCGTAGGCAGCGGGACCTGAAGAAACTTCAGGGACAATTGATAGCGGAACAGGAGGCACTTTTTGGGTCAAAACCAAGCCCTTCAAAGCCTCAGGCTTTGAAAAAGGGACCAAGGATGTCAACTGGAGGTGCAGCTAGTAGAAGAGTGTCCCTTGGAGGAGCAATGATTCAAACTCCAAAACCTGATTCAAAATCTTCACAGTCACGCCCCACGAGGAAGACTGACATTCCGCACCAAATTGACAGTCACCTGGATGATTCTGTTTCATCTTTATCGTCAGTTCGAAGAGGATTGGATATTGCCGGTGTCCCTGTAAAAAAACACTCATTTGGTGCTGGGAGTGTTCGTGATCGTGACATACAATCTCCTCTGATGCGACAACCTTTCTCTCCCCTTGCTTCAACCGCATCATCAAAAGGTAACATGAAGAACGCCACCGATGAACTGAATATACAGAGTGAGAAGTTGCAGAAAACATTTGCACCCAACAATGTGTCATTCACTACTCCCTCCAAGACGGCAACTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCAATGCCTATTCCTGTCCCGTGTACACCTTCCACAGTGTCGGTTCCAATGAATATGGCCATAACCCCAGCTCCCCCTCCTCCATTAGCTCCTATTGGAGGTGACTTGGTTCAAGAGATTGAATATTCTTTTGAGGAAAGAAGGCTCGGTTTTGCTGTTTTAGCTTGA 2412 0.4237 MFGNSITMSLTTMYLIANLMGLTVTFYPLVTGFAFDLNQNPFELFLMAISFFKISLEWPVQLVNRHSSVASTLWVLISVIFKYSKMSKPQNDPLLQVETTCGSLLFELQIIWDEVGESETERDKMLLELERECLEVYRRKVDQANRSRAQLRQAIADSEAELAAICSAMGERPVHIRQSDQKTGSLKEELGRIVPELEEMRKRKSDRRNQFIEVQEQILNISNEIFGSREFISAKTVVDESDLSLRRLEELHRELQALQKEKSDRLKIVQDHLYTLNSLCSVLGLDFKQIVSEVHPSLGDTEGPKSVTNDTIQQLAASTQKLREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQTVTCNVAASEHEITEPNTLSVDFISYVEAEVSRLEELKSSKMKELVLKKRTELEEICRKMHLVPEVDNAVEYAVEAIESGSVDPACVLEQFELQIAKVKEEAFSRKEILEKVEKWLAACDEESWLEEYNRDDNRYNAGRGAHLTLKRAEKARALVNKIPAMVDALTSKIVAWEKDKGIEFTYDGIRLLSMLEEYNILREEKEQERRRQRDLKKLQGQLIAEQEALFGSKPSPSKPQALKKGPRMSTGGAASRRVSLGGAMIQTPKPDSKSSQSRPTRKTDIPHQIDSHLDDSVSSLSSVRRGLDIAGVPVKKHSFGAGSVRDRDIQSPLMRQPFSPLASTASSKGNMKNATDELNIQSEKLQKTFAPNNVSFTTPSKTATVVDEENRTPKAMPIPVPCTPSTVSVPMNMAITPAPPPPLAPIGGDLVQEIEYSFEERRLGFAVLA 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1314 803 Gene3D - 452 586 - -
Glsi12g1314 803 Coils Coil 238 268 - -
Glsi12g1314 803 Coils Coil 134 161 - -
Glsi12g1314 803 FunFam 65-kDa microtubule-associated protein 6 453 586 - -
Glsi12g1314 803 MobiDBLite consensus disorder prediction 580 651 - -
Glsi12g1314 803 MobiDBLite consensus disorder prediction 629 645 - -
Glsi12g1314 803 Coils Coil 545 575 - -
Glsi12g1314 803 Pfam Microtubule associated protein (MAP65/ASE1 family) 104 593 - -
Glsi12g1314 803 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 96 651 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1314 Glsi-ChrGlsi12 30652689 30658145 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1314 96 634 EF-hand Containing Proteins AT5G62250 59.307 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1684 01 77926063 77946036 Glsi12g1314 12 30652689 30658145 CCT
Glsi01g1684 01 77926063 77946036 Glsi12g1314 12 30652689 30658145 ECH
Glsi12g1314 12 30652689 30658145 Glsi12g1314 12 30652689 30658145 ECH