Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1684 ATGACTTGGGCTTCGCCCAAAGGTTTTCGCAGAATGTCTTCCCACCCAAGGTCTCTTTCTTGGATTGTGGTTTCAGTGGGAGGACTAGCCGTATTCTTAGTTTTTGCTTCCTGGGTTCTCGTATCATACCCCATTGGTGCCTCAGTTCACGGATACTTCTATGGGGTAGATAGTTTTGAAAAGTTAGATGTTTCAGTCTCTCCAATCAATGAAACTATTATTGATGTTCACTTGAATAGAAGTTTAGATATAGTTGATAACAATGTGTCGTCTGATATACAACCTCCCACAACGTCCTCTAGTCTGTCAATTGACAAAAACATAGAACAGACTGACACTATATCAAATTCACAAGTACCGTTTAATGAATCCACTTCACCAAAATTTCCAAAAACCAAGGAGCCGAATGGCTTAGAAACTTCTGATGCAGCAGCTTCTAATAACAGTGAAGATGTATTTAATAGTAGCTTGTCTGTTCAGTCCAATTCAGCAGGTTCTTTGGTGGAGGCTAATGGCAGAACCAATTCTTCCAATGTAACGGGTGATATTAGAATCAATGAACCTGTTTCTGTGGTTTTGATAAATAAGTCCAGTGCTATAAGTACAACATCAAATGAGAGCTCTCTGTCTCCTGATTCTGTATCAAAATCAGTTCTAGCATCGCTTGACACACCAAATAATGCATCCTTTGGTGGTTCAGTTGATTCAGGCTGTGATCTATACCATGGAAATTGGATATATGATCCATCAGGGCCATTATACACAAACAATTCATGCCCTGTATTGACCCAGATGCAGAACTGTCAGGGGAATGGAAGGCCTGACAAAGATTATGAGAATTGGCGATGGAAGCCCTTTCAGTGTGACCTCCGACGATTTGACCCCAAGAAATTTTTGGAGCTGATGAAAGGGAAGACTTTGGCTTTCATTGGAGATTCGGTAGCTCGAAATCAGATGGAATCAATGCTGTGTATTCTCTGGCAGGTAGAGGTACCCAAGAATCGGGGAAATCGAAACATGCAGCGATACTATTTCAGGTCAACATCTGTAATGATTGTTCGGATATGGTCGTCATGGCTTGTGAAAGTCACAAGTGAACCATTTGATTATGCTCCAGCTGGGGTGGACAAGCTCCATCTTGATGCCCCTGATGAGAAGTTGATGGAATATATCCCAACTTTTGATGTGGTTGTTCTTTCTTCTGGCCATTGGTTTGCCAAGCAATCTGTGTATATATTGAACAATGAGATAGTGGGAGGGCAGTTGTGGTGGCCACACAAGTCTCGACCGATGAAGATTAATAATATGGAAGCATACAGGATATCTGTTGAAACAATTATCACTTCTCTTGTTACGCATCCAAATTACACTGGGCTTACAATTGTGCGATCCTATTCACCTGATCACTATGAGGGTGGAGCCTGGAATACAGGTGGATCATGCACTGGGAAGGTTAAGCCTCTTGGAGTCAGTGAACTGATAAAAAATGGGCATACAGATATGATGCATGAAAAACAGGTTACTGGGTTTAACCTTGCAATAAAAAAAGCAACAAATCGATCAAAGTTCAGATTGATGGATATAACTGAAGCCTTTCAATACCGCCATGATGGTCATCCTGGTCCATACAGGAACCCCGACCCACATAAGCTCACGAAACGAGGCCGAGATGGAAGGCCTCCACCCCAGGATTGCTTGCACTGGTGCATGCCAGGTCCTGTAGATACCTGGAATGAACTTGTGTTTGAAATCATTAGAAGAGAATACAGTAGCTCAAGAGGGAAAACCCAATTTACATTTATCGGGAAAATCAATCGTCTCGAATTCTCCTCCTCTCAGAAGCGTAGAAAGAAAATTCGAATACACAGCATTCGTCGATCTCTTGTTCAGATTTCTCTTGGACGGCCTGTTCAGTTAGTTGGTCATCGTTCGTCCGTTGAAAATATTAAGTGCTCCAAAATGTCAAAACCCCAGAATGATCATCTTCTGCAGACTGAAACAACATGTGGATCACTTCTGTATGAACTGCAGATAATATGGGATGAAGTTGGGGAGTCTGAGACTGAAAGAGATAAAACATTGTTTGAGCTCGAACAAGAGTGTCTACAGGTATACAGAAGAAAAGTAGATCAGGCAAATCGGTCTAGAGCTCAGTTAAGGCAGGAAATTGCTGATTCCGAAGCAGAACTTGCAGCCATCTGTTCAGCAATGGGCGAGCGACCAGTACATATTAGGAAGTCTGATCAAAATCCTGGAAGCTTGAAGGAAGAGCTAGGAAGAATTCTTCCAGAGTTAGAGGAGATGCGGAAAAGGAAGGCTGACCGCAGAAAGCAGTTTCTAGAAGTCCAAGAGCAGATACAAGATATCTCAAATGAGATCTATGGGCCCAGAGAGTATGTTCCAGTCAAAACAGTTGTAGACGAATCTGATTTAACCTTGAGAAAGCTTGAAGAATTGCACAGACAGCTGCATACACTTCAAAAGGAGAAGAGTGATCGTCTCAAGAAGGTCCAGGATGAACTTTATACTTTAAATTCTTTATGCTCAGTGCTTGGTTTGGACTTTAAGCAGGCAGTCAGTGAGGTTCATCCTAGTTTAGGAGATTCTGAAGGATCTAAGAGTGTAAGTAATGATACAATCCAGCAGTTGGCTACTGCTATACAAAAACTGAGGGAAGTTAAACTACAGAGAATGCAGAAGCTCCAAGATCTTGCAACAACAATGTTGGAGCTCTGGAACTTGATGGATACACCAATTGAAGAGCAACAGATGTTTCAGAGTGTTACTTGTAACGTAGCGGCTTCAGAACATGAAATAACTGAGCCTAATACCCTGTCTGTGGACTTTATCGATTATGTTGAGGCAGAAGTGACTAGGCTGGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTATTGAAGAAGAGGACAGAGCTAGAGGAGATTTGTCGAAAGACACACTTGGTTCCTGAAGTAAATAGTGCAGTGGAATATGCTATTGAAGCTATAGAGTCTGGATCTGTAGACCCTGCTTGTGTGCTTGAACAAATTGAGCTTCTAGTTGCCAAAGTCAAAGAGGAAGCTTTCAGCAGAAAAGAAATACTTGAGAAGGTTGAGAAATGGTTGGCAGCATGTGAAGAGGAGTCTTGGCTTGAAGAATACAACAGGGATGAGAATCGGTACAATGCCGGCAGAGGTACTCATCTCACTCTTAAGCGAGCTGAGAAAGCTCGTGCCTTGGTAAACAAAATTCCAGCAATGGTAGATGCGTTGAAATCCAAAACTGTCGCATGGGAAAAGGACATAGGCATCGAGTTCACATATGATGGTATCCGTCTTCTTTCTATGCTTGAAGAGTATATTATATTACGGCAAGAGAAAGAGCAAGAACGTCGTAGGCAGCGGGATATGAAGAAACTTCAGGGACAATTCATAGCAGAACAGGAGGCACTTTATGGGTCAAAACCAAGTCCTTCCAAGCCCCAGAGTGTTAGAAAGGCACCTAGGACGTCGACTGGTAGTGCAACTAGTAGAAGAGTCTCTCTTGGAGGAGCAATGCATCAAACTCCGAAACCTGATTCGAAAGGTACTCAGTCACGCCCGAAGAGGAAGAGTGACAAGGTGCACCAAATTGACGAATTTAATCATCTGGATGGTAGCGCTTCATCTATATCATCCGCAAGAAGAGGGTTGGATATTGCTAGCGTCCCTGTAAAAAAGCACTCATTTGGTGCTGGGAGTGTTCGTGACATAGAATCATCTCCTTCGATGCGACAACCTTTCTCTCCCGTCTCTTCAACTGTATCATCAAAAGCAAACATGGCAAATGCCAGAAATGAACTGAATATACAGGGTGAGAGGTTGCAGAAACCTATGGCACTCAAAAATGAGAGCACATTCATGACTCCCTCCAAGACAGCATTTGTGGTAGATGAAGAGAATAGAACTCCAAAGGCAAAGTCTATGACTATTCCTGCCCCCACTACACCTTCGGCAGTGTCAATTCCTATGAGTATGGCCATGACTCCAGCTCCTCCTCTATCAGTTCCACTCGGATGTGACTTGGTTCAAGAGATTGAATACTCTTTTGAGGAAAGAAGAGCTGGTTTTGTTGTCCTAGCATGA 4125 0.4267 MTWASPKGFRRMSSHPRSLSWIVVSVGGLAVFLVFASWVLVSYPIGASVHGYFYGVDSFEKLDVSVSPINETIIDVHLNRSLDIVDNNVSSDIQPPTTSSSLSIDKNIEQTDTISNSQVPFNESTSPKFPKTKEPNGLETSDAAASNNSEDVFNSSLSVQSNSAGSLVEANGRTNSSNVTGDIRINEPVSVVLINKSSAISTTSNESSLSPDSVSKSVLASLDTPNNASFGGSVDSGCDLYHGNWIYDPSGPLYTNNSCPVLTQMQNCQGNGRPDKDYENWRWKPFQCDLRRFDPKKFLELMKGKTLAFIGDSVARNQMESMLCILWQVEVPKNRGNRNMQRYYFRSTSVMIVRIWSSWLVKVTSEPFDYAPAGVDKLHLDAPDEKLMEYIPTFDVVVLSSGHWFAKQSVYILNNEIVGGQLWWPHKSRPMKINNMEAYRISVETIITSLVTHPNYTGLTIVRSYSPDHYEGGAWNTGGSCTGKVKPLGVSELIKNGHTDMMHEKQVTGFNLAIKKATNRSKFRLMDITEAFQYRHDGHPGPYRNPDPHKLTKRGRDGRPPPQDCLHWCMPGPVDTWNELVFEIIRREYSSSRGKTQFTFIGKINRLEFSSSQKRRKKIRIHSIRRSLVQISLGRPVQLVGHRSSVENIKCSKMSKPQNDHLLQTETTCGSLLYELQIIWDEVGESETERDKTLFELEQECLQVYRRKVDQANRSRAQLRQEIADSEAELAAICSAMGERPVHIRKSDQNPGSLKEELGRILPELEEMRKRKADRRKQFLEVQEQIQDISNEIYGPREYVPVKTVVDESDLTLRKLEELHRQLHTLQKEKSDRLKKVQDELYTLNSLCSVLGLDFKQAVSEVHPSLGDSEGSKSVSNDTIQQLATAIQKLREVKLQRMQKLQDLATTMLELWNLMDTPIEEQQMFQSVTCNVAASEHEITEPNTLSVDFIDYVEAEVTRLEELKSSKMKELVLKKRTELEEICRKTHLVPEVNSAVEYAIEAIESGSVDPACVLEQIELLVAKVKEEAFSRKEILEKVEKWLAACEEESWLEEYNRDENRYNAGRGTHLTLKRAEKARALVNKIPAMVDALKSKTVAWEKDIGIEFTYDGIRLLSMLEEYIILRQEKEQERRRQRDMKKLQGQFIAEQEALYGSKPSPSKPQSVRKAPRTSTGSATSRRVSLGGAMHQTPKPDSKGTQSRPKRKSDKVHQIDEFNHLDGSASSISSARRGLDIASVPVKKHSFGAGSVRDIESSPSMRQPFSPVSSTVSSKANMANARNELNIQGERLQKPMALKNESTFMTPSKTAFVVDEENRTPKAKSMTIPAPTTPSAVSIPMSMAMTPAPPLSVPLGCDLVQEIEYSFEERRAGFVVLA 1374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1684 1374 Gene3D - 1021 1154 - -
Glsi01g1684 1374 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 291 583 IPR026057 GO:0016740
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 113 131 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 1247 1270 - -
Glsi01g1684 1374 Coils Coil 1123 1143 - -
Glsi01g1684 1374 Coils Coil 765 785 - -
Glsi01g1684 1374 Pfam PMR5 N terminal Domain 237 289 IPR025846 -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 113 144 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 536 560 - -
Glsi01g1684 1374 Pfam Microtubule associated protein (MAP65/ASE1 family) 671 1162 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 1155 1183 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 540 560 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 1196 1214 - -
Glsi01g1684 1374 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 664 1226 IPR007145 GO:0000226|GO:0008017
Glsi01g1684 1374 FunFam 65-kDa microtubule-associated protein 6 1021 1154 - -
Glsi01g1684 1374 Coils Coil 702 736 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 1148 1227 - -
Glsi01g1684 1374 MobiDBLite consensus disorder prediction 1252 1270 - -
Glsi01g1684 1374 Coils Coil 809 836 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1684 Glsi-ChrGlsi01 77926063 77946036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1684 664 1173 EF-hand Containing Proteins AT5G62250 60.039 0.0 553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1684 01 77926063 77946036 Glsi12g1314 12 30652689 30658145 CCT
Glsi01g1684 01 77926063 77946036 Glsi12g1314 12 30652689 30658145 ECH
Glsi01g1684 01 77926063 77946036 Glsi01g1684 01 77926063 77946036 ECH