Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2441 ATGCAGAAACAAACCCTAGCTAGCATTTTGACTACGATGTGTTTTCAAGCCAAGTTTTGTCGTAACATTGCTCAGCCAGCATGCACCGTCTTCATAAACCACCGTGGGATTGATACCAAGAGAACCGTGGTTCGGTTACTCTACGACCATCTGATGAGGCAAGGAGCCCAGCCCTTCTTGGACGCCGTCAACCTTAAACCGGGAGATAGATTGTTCGATAATATTGACAAGGCCATTGTCGGGTGTAAGGTTGGAGTTGCTGTGTTTTCGCCTCGTTATTGTGACTCTTCTTTCTGTCTCCGTGAGCTCTCCCTCCTCGTTGAGTCTAAGAAAAGAATCGTCCCTATTTTTTACGATGTCAAGCCATCTCAGCTTCAGGTTAAGGACAATGGAAGTTGTACGGATGAAGAGCTCAGCAGGTTTAGTTTGGCACTTGAAGAAGCTAAATACACTGTGGGGCTACCCTACGACTCGTTACGAGGGGACTGGTCGGAGCTGCTAAGGAAAGCTTCAGATGCAGTGATTCAGAACTTGGTTGAGGTAGAGGAGGAAGAGAAGAAGGGCATGAGCTAG 573 0.4747 MQKQTLASILTTMCFQAKFCRNIAQPACTVFINHRGIDTKRTVVRLLYDHLMRQGAQPFLDAVNLKPGDRLFDNIDKAIVGCKVGVAVFSPRYCDSSFCLRELSLLVESKKRIVPIFYDVKPSQLQVKDNGSCTDEELSRFSLALEEAKYTVGLPYDSLRGDWSELLRKASDAVIQNLVEVEEEEKKGMS 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2441 190 SUPERFAMILY Toll/Interleukin receptor TIR domain 28 149 IPR035897 -
Glsi11g2441 190 Gene3D - 24 183 IPR035897 -
Glsi11g2441 190 ProSiteProfiles TIR domain profile. 26 171 IPR000157 GO:0007165
Glsi11g2441 190 SMART till_3 27 173 IPR000157 GO:0007165
Glsi11g2441 190 Pfam TIR domain 29 126 IPR000157 GO:0007165
Glsi11g2441 190 PANTHER COP1-INTERACTING PROTEIN-RELATED 28 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2441 Glsi-ChrGlsi11 17183884 17184549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2441 23 187 Miscellaneous Gene Families AT1G57670 29.121 1.52e-16 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2439 11 17158173 17161469 Glsi11g2441 11 17183884 17184549 CCT
Glsi11g2441 11 17183884 17184549 Glsi11g2441 11 17183884 17184549 ECH