Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2439 ATGGACTTAGTGGGGCATAAAGAATTCATAACACAATGTAGTAAATCTAATGGGCCAGATCCCAGTTGTGAAAGTTGGTGGTTTGATGCGGGTGGTTTGCTAAGAGCAGATTCGAAGCCAATAGTAGAGGATTCGTTTTTCGGAGTAGCAGCGGCTCGAGCATGCGACGTGTTCATAAGCTACCGCGGGGTTGATACCAATAGAACCGTGGTTCGATTGCTCTACGACCACCTCAAAAAGCGAGGAGCCAACCCCTTCTTGGACCCCGCCAACCTTAAGCCAGGAGATAGACTGTTCGATCATCTCGGCAAGGCTATAGGTGTGTGTAAGAGTGGGGTTCCTGTGGTTTCACCTCATTATTGTGACTCATATTTCTGCCTCCACGAGCTTGCACTTCTGGTTGAGTCTAAGAAAAGAATCGTTCCCATTTTCTATGACGTCAACCCATCCCAGCTGAAGGTTAAGCACAATGGAAGTTTTTCCAGGAAAGACTTTCACAGGGACTTGTCGGAGCTGGTAAGGCAAGCTTCAGATGCAGTCATGAACTTGGTTTAG 555 0.4739 MDLVGHKEFITQCSKSNGPDPSCESWWFDAGGLLRADSKPIVEDSFFGVAAARACDVFISYRGVDTNRTVVRLLYDHLKKRGANPFLDPANLKPGDRLFDHLGKAIGVCKSGVPVVSPHYCDSYFCLHELALLVESKKRIVPIFYDVNPSQLKVKHNGSFSRKDFHRDLSELVRQASDAVMNLV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2439 184 Pfam TIR domain 57 172 IPR000157 GO:0007165
Glsi11g2439 184 Gene3D - 40 182 IPR035897 -
Glsi11g2439 184 ProSiteProfiles TIR domain profile. 53 180 IPR000157 GO:0007165
Glsi11g2439 184 PANTHER TMV RESISTANCE PROTEIN N-LIKE 55 168 - -
Glsi11g2439 184 SUPERFAMILY Toll/Interleukin receptor TIR domain 55 152 IPR035897 -
Glsi11g2439 184 SMART till_3 54 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2439 Glsi-ChrGlsi11 17158173 17161469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2439 56 160 Miscellaneous Gene Families AT1G57670 33.028 4.49e-12 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2439 11 17158173 17161469 Glsi11g2441 11 17183884 17184549 CCT