Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g2315 ATGAGGCTATGTATTCGGCGCAGGAATGAGATGGTCTCACGGGATTACAAAGACGTTGAGGAAGATCTGAAATGTGATCAACAGAAGAAAATAGAGGTGGATTGCCTTAGTTTGTTGCCTGATGAAATCATTGCGGCCGTCTTATCTCAATTGATACTAACGGAAGCTGTCAAAACCAGCATCCTCTCAGTTAGATGGAGATGCGCATTTTGGATTTTAATGGTTGATCAAGTGCTAAAATCGCTTCAAAATCCAAACGTGGATGGACTGCGAATTTGTGCTGATGTGGTTAAGTGTAATGCAAGCCGTGTTGATGATTGGGTGCCGTTTGCTATAGAGAAAAAGGTGAAGAAGCTTGAGTTGGATTTTATTAATTTCCTTGAGTATTGTGACGTTCCTTCATCACTGCTTAATTTTACAAGCTTTGGTTCCTTGCATGTCCTCCGTTTGACATATGTGGATGTGAGTGGGGAGCTTCTCAACCACTTCTTGTTTTCTTGTCCCGTTCTTGAAACATGGGGTGTTGATTCTTCAGAAAGTGTGGTGAGTTTTAAAGTTTCTATTTCATCATTGTTGAAACTTAAACAATGGGAGATAAAAAGATTTGTGCATTCCAAATGTCCTCGAACGAATAGAAAGCTCACAAGACGAGTCATCGTGAGTGGGGATGTAGCTTCTAGGAATCTGTTGACCGATAGTATTCAAGAACGCCCTTCCCCTTCTCTCTCTCTTAGTTCATCAATCATCATGCACCAAGCCATCCCATATAGGACCTGGCTCCCCGCCGGCGCACTTGACTCACGTGACCTACCAGCTGCCGCCGGAGGAAGCCGGGAAGCCAATGGCGTGGATCCAGCTGACGTGGTCCGGATGATATCAGAGAACGCAGTGATAGTAATTGGGAGACGTGGGTGCTGCATGTGCCATGTCGTGAAAAGGTTGTTACAAGGTCTAGGTGTGAACCCTCCTGTGTACGAGGTGGACAAGGACGATGAAGCTGCCGTAGCCGGTGAACTGTCGAGGAAGATTGGCGGTGCCGGCGGAGTGCAGTTTCCGGCGGTGTTTGTGGGCGGGAAGTTGTTTGGAGGGTTGGAAAGAGTCATGGCCACTCATATTTCAGGTGAATTGATTCCTATACTGAAGGATGCTGGGGCCTTGTGGCTGTGA 1167 0.4653 MRLCIRRRNEMVSRDYKDVEEDLKCDQQKKIEVDCLSLLPDEIIAAVLSQLILTEAVKTSILSVRWRCAFWILMVDQVLKSLQNPNVDGLRICADVVKCNASRVDDWVPFAIEKKVKKLELDFINFLEYCDVPSSLLNFTSFGSLHVLRLTYVDVSGELLNHFLFSCPVLETWGVDSSESVVSFKVSISSLLKLKQWEIKRFVHSKCPRTNRKLTRRVIVSGDVASRNLLTDSIQERPSPSLSLSSSIIMHQAIPYRTWLPAGALDSRDLPAAAGGSREANGVDPADVVRMISENAVIVIGRRGCCMCHVVKRLLQGLGVNPPVYEVDKDDEAAVAGELSRKIGGAGGVQFPAVFVGGKLFGGLERVMATHISGELIPILKDAGALWL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g2315 388 SUPERFAMILY Thioredoxin-like 289 387 IPR036249 -
Glsi11g2315 388 Gene3D Glutaredoxin 285 387 - -
Glsi11g2315 388 ProSiteProfiles Glutaredoxin domain profile. 285 387 - -
Glsi11g2315 388 SUPERFAMILY F-box domain 31 75 IPR036047 GO:0005515
Glsi11g2315 388 NCBIfam glutaredoxin-like family 288 388 IPR011905 -
Glsi11g2315 388 Pfam Glutaredoxin 297 360 IPR002109 -
Glsi11g2315 388 CDD GRX_GRXh_1_2_like 296 379 - -
Glsi11g2315 388 PANTHER GLUTAREDOXIN 287 388 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g2315 Glsi-ChrGlsi11 16225405 16236874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g2315 287 388 Miscellaneous Gene Families AT4G15700 41.748 1.06e-22 90.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g2315 11 16225405 16236874 Glsi11g2315 11 16225405 16236874 ECH
Glsi11g2315 11 16225405 16236874 Glsi04g0841 04 6030031 6030501 ECH