Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi04g0841 ATGCAGCAAGCACTTCCTTACAGGTCATGGCACCCCATCCCCATAACCACCACCACCACCGCCCACTTCACCCCCCAGTCATTGATTACTTCCCACAATATGAACAACCCATCCTCTGTTTCGGCCAAGGTTCTAGCAAGAGGAACCACAGAAGGAATGGTGCTGAACATGGTGTCAGAGAACGCAGTCATAGTCTTTGCTAGGCGTGAGTGCTGCATGAGCCATGTGGTAAGGCGTTTGCTTCTGGGTCTTGGTGTTAACCCTGCGGTTTACGAGGTGGAGGAGAAAGACGAAGTGGGTGTTGTTAGAGAACTCGAAGCAATTGGTGATGGAGAGAAACAGGGGAAGGTGCAGTTCCCAGCAGTGTTTATAGGTGGGAAATTGTTTGGAGGATTGGATCGGCTTATGGCTACTCATATTTCTGGTGAATTGGTTCCAATTCTGAAAGAAGCAGGGGCTTTATGGCTCTGA 471 0.4968 MQQALPYRSWHPIPITTTTTAHFTPQSLITSHNMNNPSSVSAKVLARGTTEGMVLNMVSENAVIVFARRECCMSHVVRRLLLGLGVNPAVYEVEEKDEVGVVRELEAIGDGEKQGKVQFPAVFIGGKLFGGLDRLMATHISGELVPILKEAGALWL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi04g0841 156 SUPERFAMILY Thioredoxin-like 52 155 IPR036249 -
Glsi04g0841 156 CDD GRX_GRXh_1_2_like 62 147 - -
Glsi04g0841 156 ProSiteProfiles Glutaredoxin domain profile. 51 155 - -
Glsi04g0841 156 PANTHER GLUTAREDOXIN 54 156 IPR011905 -
Glsi04g0841 156 Pfam Glutaredoxin 63 128 IPR002109 -
Glsi04g0841 156 NCBIfam glutaredoxin-like family 55 156 IPR011905 -
Glsi04g0841 156 Gene3D Glutaredoxin 47 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi04g0841 Glsi-ChrGlsi04 6030031 6030501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi04g0841 57 156 Miscellaneous Gene Families AT4G15690 45.000 6.95e-28 98.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi14g1255 14 13626503 13627887 Glsi04g0841 04 6030031 6030501 CCT
Glsi04g0841 04 6030031 6030501 Glsi04g0841 04 6030031 6030501 ECH
Glsi11g2315 11 16225405 16236874 Glsi04g0841 04 6030031 6030501 ECH