Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1601 ATGGGTGCAAGTAGAAAACTTCAGGGAGAGATCGATCGTGTTCTGAAGAAGGTCCAAGAAGGCGTTGAAGTCTTCGACAGTATCTGGAACAAGGTATACGATACTGAAAATGCGAACCAGAAGGAGAAATTTGAGGCAGACCTGAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACTTGGATTCAGTCTAGCGAGATCAAGGACAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTGGTGGATGCTCGCAAGCTCATTGAGCGTGAAATGGAAAGATTTAAGATCTGCGAGAAGGAGACTAAAACCAAAGCTTTCTCCAAAGAAGGTTTGGGCCAACAGCCCAAAACTGATCCAAGAGAGAAGGCTAAATCAGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAGTTGGAATCTCAGATTGATAGCTTTGAAGCTGAGGTTGAAGGGCTTTCTGTTAAAAAAGGAAAGAATAGACCACCCAGATTGATGCATTTAGAGACATCAATTACTCGACACAAGGCTCATATAAAGAAATGTGAATTTCTCTTGAGACTACTAGATAATGAGGAATTAAGTCCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGATGACTATGTAGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGATGTCGATGAGCTATACAGTTCATTACCTTTAGACAAGGTGGAGTCTCTCGAAGATCTTGTTACAATTGGCCCCCCTGGTATTACCAAGGTTGCTACTGGTCTCAGCTTGAAAACTTCTGTGGCAACATCAGCGCCAGCATCAGCATCAGCATCTCAGACATCTGAGCAAGCAGATGATACAGCTTCCCAGGATAGCAGTTCTGATATTGTTGCAAGAACTCCACCTTCTAAAAGTATTGGAATTAGTTCTGCTATTTCAACACTAGCTGGAAACCATGCCACTCCTGTTTCTATAGATGTTTCAGCTCATAACGTCTCTGGAGCACCAGCTGCTGTGTCAGTCCTCCCTGGTTCAAATCCTGTTCGGAGTATCTTGGAGAATCTTAGTGCTGCCAATTCTTCATCTTCGGTAAATCAGTCTGGCTCTATGAAGGAAGAAGAGAATAATAGCTTCCCTGGACGGAGACCATCTCCATCACTTTCTGATGCTGCGCTTGTGAGGGGTATTGGCAGAAACACCCTGTTGAATCAAGCAACTACTAGTATTCCTCTTGGGTCAGGAAACATGCTTTCCAGCAATGGGGCCCTTGGTTCAATCCCTTCAGCCTCTGAAATAACTAAGAGAAACATATTGGGTGCTGATGATAGACTTGGAAGTAGTGGCATGGTGCAGCCTCTTGTATCCCCCCTTAGTAACAGAATGGTCATGCCTCAGGCTGCAAAGGCTAATGATGGAACTGCTTCAGTTGACTCTAGTAATGTTAATGAGGCTGCATCTGTATCTGGGCGAGTTTTTTCACCTACTGTGGTTCCTGGCATGCAATGGAGACCTGGAAACCCTTTCCAGATCCAGAATGAGGGGCAGCTTCGCGGAAGAACTGAAATAGCTCCTGATCAAAGGGAGAAATTTTTGCAAAAGTTTCAGCAAGTTCAGCAACAAGGGCACAGTACCCTTCTTGGTATGCCTTCTCTTGCTGGAGGAAATCATAATCAATTTTCTGCTCAGCAGCAAAACCCTCTATTGCACCAGTTTAGCTCCCAAGGCTCATCTGTTTCCTCTCAATCTGGTCTGGGACTTGGAGTCCAGGCATCAGGTTTCAGTGGTATTTCGTCCACCTCATTACAGCAGCCACCTAATTCTATCCATTCCCCGTCTAACCAGCAGCAATTGATATCAGATGTTTCTAAAGATGCCGATGTTGGCAATTCTAAGGTCGAAGAACAGCAGCAACAGCAGAATTTTGTTGATGAGGCAGCAACCGACTCTACTGCTAGTTCTGGGCTTGGCAAGAATATCATAAATGAAGATGATTTGAAATCCACCTATACAGTTGATTCTCCGGCAGGATTATCTGGCTCTCTTCCAGAGCCTGTGCAGACTTCCAGAGATTCTGACTTGCCTCCTGGCCAACCTTTACAATCCAATCAACCTTCTGGTAACCTTGGTGTCATTGGAAGGAGAAGTGGTGCCGACCTTGGAGCCATTGGTGATAACTTTAGTGGATCAAGTGTTACTTCTAGTGGAATACGTGATCAATTATATAATTTGCAAATGCTTGAGGCAGCTTACTACAAACTTCCACAACCTAAAGATTCAGAACGGCCAAGGACTTATACTCCTAGGCACCCAACTATAACACCTCCTAGTTATCCTCAAGTACAGGCACCCATTGTTAATAATCCTGCCTTTTGGGAGAGAGTAGGTCTTGAACCATATGGAACTGATACCTTGTTCTTTGCATTTTATTATCAGCAGAACACTTATCAACAATATTTGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGATATCACAGAAAGTATAACACATGGTTTCAGCGACATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGCAGGGAACATATGTATACTTTGATTTCCATATTGCAAATGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGACCGAGTTCACCTTTGAGTATAATTATCTTGAAGACGAGCTTATTGTATAG 2679 0.4356 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTENANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPREKAKSETRDWLNNVVGELESQIDSFEAEVEGLSVKKGKNRPPRLMHLETSITRHKAHIKKCEFLLRLLDNEELSPEQVNDVKDFLDDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPGITKVATGLSLKTSVATSAPASASASQTSEQADDTASQDSSSDIVARTPPSKSIGISSAISTLAGNHATPVSIDVSAHNVSGAPAAVSVLPGSNPVRSILENLSAANSSSSVNQSGSMKEEENNSFPGRRPSPSLSDAALVRGIGRNTLLNQATTSIPLGSGNMLSSNGALGSIPSASEITKRNILGADDRLGSSGMVQPLVSPLSNRMVMPQAAKANDGTASVDSSNVNEAASVSGRVFSPTVVPGMQWRPGNPFQIQNEGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSLAGGNHNQFSAQQQNPLLHQFSSQGSSVSSQSGLGLGVQASGFSGISSTSLQQPPNSIHSPSNQQQLISDVSKDADVGNSKVEEQQQQQNFVDEAATDSTASSGLGKNIINEDDLKSTYTVDSPAGLSGSLPEPVQTSRDSDLPPGQPLQSNQPSGNLGVIGRRSGADLGAIGDNFSGSSVTSSGIRDQLYNLQMLEAAYYKLPQPKDSERPRTYTPRHPTITPPSYPQVQAPIVNNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELIV 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1601 892 MobiDBLite consensus disorder prediction 668 711 - -
Glsi11g1601 892 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Glsi11g1601 892 PANTHER CCR4 NOT-RELATED 24 889 IPR040168 GO:0030015
Glsi11g1601 892 Coils Coil 41 61 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 629 656 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 110 131 - -
Glsi11g1601 892 Gene3D - 731 887 IPR038635 -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 268 301 - -
Glsi11g1601 892 Pfam NOT2 / NOT3 / NOT5 family 748 886 IPR007282 GO:0006355
Glsi11g1601 892 PIRSF NOT_su_3_5 1 892 IPR012270 GO:0006355|GO:0030015
Glsi11g1601 892 Coils Coil 139 159 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 668 707 - -
Glsi11g1601 892 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 732 887 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 593 621 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 593 656 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 356 381 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 356 386 - -
Glsi11g1601 892 MobiDBLite consensus disorder prediction 753 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1601 Glsi-ChrGlsi11 10033144 10043849 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2157 12 36422445 36432420 Glsi11g1601 11 10033144 10043849 CCT