Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1600 ATGGAAAAGATGTGGTTTTTGAAATTGGTATTGGTGATGGGGATGGTCGGTTGCTACGTTTCAGCGCTTGGGGTGAATTGGGGAACCCAGGCCACACATCAGTTGCCTCCAGACACGGTGGTTCAGATGATGAAGAACAATGGAATTCAGAAAGTGAAACTGTTTGATGCAGATGAGTCCACTATGAGTGCCCTGGCTGGGAGCGGGATCGAAGTTATGGTTGCCATTCCTAATAATCAGCTAGCTGCGATGAATGACTATGATCGAGCTAAACAGTGGGTTCGGAAGAATGTTACCCGCTACAACTTCAAGGGTGGGGTTAACATCAAGTATGTCGCTGTTGGGAATGAGCCATTTTTGAAATCCTATAATAATTCATTCTTGAACGTCACCTTACCAGCACTACAGAACATACAAAATGCCCTTAATGACGCTCACGTTGGGGACTCCATAAAGGCTACGGTGCCCTTAAATGCTGATGTGTACGAGTCCCCCGCAGATAACCCTGTTCCATCTGCAGGAAGATTTAGGGCTGATATTAGTGATCTCATGACCCAGATAGCCCAATTCTTGAACAAGAATGGAGCACCATTCACTGTAAACATTTACCCCTTCTTAAGTCTTTATGGGAATGATGATTTTCCTTTTGACTATGCTTTCTTCGATGGGGTTGCCAATCCCATAAATGATAATGGGACTCCATACACCAACGTGTTTGATGCAAATTTTGATACCTTGGTTTCTGCTCTGAAAGCCGTGGGATATGGAGATATGACCATTTTGGTAGGAGAAGTAGGGTGGCCTACAGATGGGGATAAGAATGCCAATGCAGGAAATGCTTTAAGATTTTATAATGGGCTTCTACCAAGGCTCGCAGCAAACAAAGGCACGCCGCGTCGCCCGGGAATTATCGAAGTTTATCTGTTTGGACTTATTGATGAGGATGCCAAGAGCATTGCTCCAGGTAACTTCGAGCGTCACTGGGGAATTTTCAGGTATGATGGGCAGCCCAAGTTTCCAATGGATTTCTCTGGTCAGGGTCAGAACAAATTACTGATAGGCGCACAGAATGTGAAATATCTTTCTTCGACGTGGTGCATGTTTAATCCAGATGCCAAGGATCTCAGCAAACTTGCAGATAATATAAATTATGCTTGCACCTTTGGGGACTGCACTGCACTTGGATATGGCTCGTCTTGCAATAGCCTTGATGCTAATGGGAATGCCTCGTATGCATTTAATATGTATTTCCAAGTGCAAAATCAGGATGACATGGCCTGCGACTTTCAAGGTTTGGCCAAGCTTACTACACAGAATATCTCAACACCAGCTTGCAATTTTCTTATTCAGATATCATCCTCTCCTTTGAGGTCCTCATTGGTAGCTTCCGTATTTATTACATTATCGATGATTCTATTTTTGTAG 1425 0.4386 MEKMWFLKLVLVMGMVGCYVSALGVNWGTQATHQLPPDTVVQMMKNNGIQKVKLFDADESTMSALAGSGIEVMVAIPNNQLAAMNDYDRAKQWVRKNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNVTLPALQNIQNALNDAHVGDSIKATVPLNADVYESPADNPVPSAGRFRADISDLMTQIAQFLNKNGAPFTVNIYPFLSLYGNDDFPFDYAFFDGVANPINDNGTPYTNVFDANFDTLVSALKAVGYGDMTILVGEVGWPTDGDKNANAGNALRFYNGLLPRLAANKGTPRRPGIIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDFSGQGQNKLLIGAQNVKYLSSTWCMFNPDAKDLSKLADNINYACTFGDCTALGYGSSCNSLDANGNASYAFNMYFQVQNQDDMACDFQGLAKLTTQNISTPACNFLIQISSSPLRSSLVASVFITLSMILFL 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1600 474 FunFam Glucan endo-1,3-beta-glucosidase 8 360 455 - -
Glsi11g1600 474 Pfam X8 domain 364 433 IPR012946 -
Glsi11g1600 474 Gene3D Glycosidases 22 350 - -
Glsi11g1600 474 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 436 IPR044965 GO:0004553|GO:0005975
Glsi11g1600 474 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Glsi11g1600 474 SMART X8_cls 364 447 IPR012946 -
Glsi11g1600 474 Gene3D - 359 456 - -
Glsi11g1600 474 SUPERFAMILY (Trans)glycosidases 23 343 IPR017853 -
Glsi11g1600 474 Pfam Glycosyl hydrolases family 17 23 343 IPR000490 GO:0004553|GO:0005975
Glsi11g1600 474 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1600 Glsi-ChrGlsi11 10026704 10029366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1600 9 474 Miscellaneous Gene Families AT1G64760 74.893 0.0 718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g2159 12 36435932 36439479 Glsi11g1600 11 10026704 10029366 CCT