Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1414 ATGCTCGACAATCTTAAAAGCTTGATTGATCTCACTCCCTTCTGCTTCTTCTTGGGTTCCGATCTAACTCTGTTTTGGGGCGGAACAGAAACAGAGGAATCTGTTGCTGGCATGCTTTCAGATCTTGCAGAACTAGAATCCCAATGTCTCACGGCCCTTTATTTTGTTTACGTACGCTTCCCTGTCCCTGTAACTCTTGCTTCTCGCTTGGCCTTCTTTTATATTGTCTTGGCTTGGCTTGGCGGGAACTTGCTTAATTGCCTTTATCTGCCTGTTAGTCGTGAACTTCTTCTGATATTCCGGCTTGACTTGGGTCCTTGTTCTCTCCATTATTCATTCATTTACACAGGAATGGATATAAGTAATGATGCTAGTGTCGACCCTTTTTCCATTGGACCCTCGGGCATTATTGGACGAACAATTGCTTTCAGAATTCTTTTCTGTAAGTCTACATCACATTTGAAGCATCAGATGTTTCGGGTGTTGGTGAATATCATCTATAGGTTTAGGGAAATTTTGGCACCCATTATATCATGGTTGCATCCAAGAAATCCACAGGGGATATTAGCAATGGTGACAATGATTGCTTTCTTGTTGAGGCGATACACAAATGTGAAGGTAAAGGCTGAAATGGCATATCGGAGGAAATTTTGGAGAAATATGATGACAACTGCATTGACCTACGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAATCAGACCTTTACGATGTAGAATTAGTGAGGAATAAGCTTCAAGAGCTCCACCACCGTCGGCAAGAGGGATCTCTTAGAGATATAATATTTTTTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGCAACCCTGAGCTTCACAAAGGTAGGCTTCAGGTGCCCAAATTAATCAAGGAGTATATTGATGAGGTATCGACTCAGTTGAGAATGGTCTGTGACTCTGATTCAGAGGAGCTCTCGTTGGAAGAAAAGCTTGCTTTCTTGCATGAAACTAGACATGCATTTGGCAGGACTGCTTTACTGTTAAGTGGGGGTGCTTCTCTTGGATCTTTTCATGTCGGTGTAGTTAAAACACTGGTAGAACATAAACTCTTGCCGAGGATAATTGCTGGTTCGAGTGTGGGATCCATTATGTGTGCTGTTGTTGCTACTAGGTCTTGGCCTGAGCTTCAAAGCTTTTTTGAGCATTCATGGCATTCATTGCAGTTTTTTGACCAAATGGGTGGAATTTTTACAGTTGTGAAGAGGGTCATGACTCGTGGTGCTGTTCATGAGATCAGACAATTGCAAATAATGTTGAGGCATCTAACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACGGGTCGGATTCTTGGGATAACAGTTTGCTCCCCAAGAAGACATGAACCACCTAGATGTCTTAACTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACTGCTTCGTGTGCCTTTCCTGGTCTTTTTGAGGCTCAGGAACTAATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCATCCTCCATTTAATTTGGGACCAGAGGAGGGATCTACATCAGTGCGCCGTTGGAGGGATGGTAGCTTGGAGATTGATTTACCGATGCTGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTTATTGTGAGTCAGGCCAATCCACATATTGCACCATTACTGAGATTGAAAGAATTTGTAAGAGCTTGTGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTTACTGAGATGGAAGTGAAACATAGATGTAATCAAATACTGGAACTTGGTTTTCCATTAGGTGGACTTGCCAAGCTGTTTGCTCAAGACTGGGAGGGTGATGTAACTGTTGTTATGCCTGCAACTCTTGCTCAGTACTCCAAAATTATACAAAACCCTTCTCATGTGGAGCTTCAAAAGGCAGCCAACCAAGGGAGAAGGTGCACCTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGGCATTGAGCTTGCTCTTGATGAATGTGTTGCAATTCTCAATCATATGAGAAGACTCAAAAGAAGTGCTGAAAGAGCAGCTGCTTCTTCTCATGGTCTGGCCAGTACTGTCAAATTCAGTGCTTCAAGAAGAATTCCTTCATGGAATTGCATTGCACGAGAGAATTCAACAGGATCCTTAGAAGAAGACCCTCTTGGTTGTTCCAATGGAGCCACAGCTAGAAGTTGGAAGACCCACCGTAGTATACATGATGGAAGCGACAGTGAATCTGAAAGTGTTGATCTAAGCTCTTGGACGAGATCTGGTGGGCCTTTGATGAGAACTACTTCGGCAAATATGTTCATTGACTTTGTCCAAAACTTAGATGTTGATACTGACCTAAATAGTGGCTTGGTGGTTCATCCTAGCTCTCCTGTTTTTCAGTATAATCACAGTCCCAGGGTCACAACACCAGATAGGAGCTCTCAGGGGACAGAATTTGATCAGAGGGAAATCGGCAACAGGGTTGTCATAAATGGATGTGGCATAATGGTAACCGAAGGTGATCTTTTGCAGCCTGAAAGAATCCAAAATGGGATTGTGTTTAATGTTGTCAAGAAAGAAGACTTGACACATTTGAATAGGAGTCTTGATTTTGAAAATTACAACAATGAAGTTGCTGAATGTGTCCAAATTGACTGTCCAGGGAAGGAGATGGATGCTGCTAGCTCAACTTCTGAATATGGAGTAGATGATTCAGATTCCGCTGCAACAAAGTCCCTGTGTCAAAACCCTGAGTTTAATTCTATGGATAATTCTGGCTCAGATGTAGGTAAGGATGAGATCATTGTCGACGGTTGA 2856 0.4254 MLDNLKSLIDLTPFCFFLGSDLTLFWGGTETEESVAGMLSDLAELESQCLTALYFVYVRFPVPVTLASRLAFFYIVLAWLGGNLLNCLYLPVSRELLLIFRLDLGPCSLHYSFIYTGMDISNDASVDPFSIGPSGIIGRTIAFRILFCKSTSHLKHQMFRVLVNIIYRFREILAPIISWLHPRNPQGILAMVTMIAFLLRRYTNVKVKAEMAYRRKFWRNMMTTALTYEEWAHAAKMLDKETPKMNESDLYDVELVRNKLQELHHRRQEGSLRDIIFFMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVSTQLRMVCDSDSEELSLEEKLAFLHETRHAFGRTALLLSGGASLGSFHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEHSWHSLQFFDQMGGIFTVVKRVMTRGAVHEIRQLQIMLRHLTSNLTFQEAYDMTGRILGITVCSPRRHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEEGSTSVRRWRDGSLEIDLPMLQLKELFNVNHFIVSQANPHIAPLLRLKEFVRACGGNFAAKLAHLTEMEVKHRCNQILELGFPLGGLAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSHVELQKAANQGRRCTWEKLSAIKANCGIELALDECVAILNHMRRLKRSAERAAASSHGLASTVKFSASRRIPSWNCIARENSTGSLEEDPLGCSNGATARSWKTHRSIHDGSDSESESVDLSSWTRSGGPLMRTTSANMFIDFVQNLDVDTDLNSGLVVHPSSPVFQYNHSPRVTTPDRSSQGTEFDQREIGNRVVINGCGIMVTEGDLLQPERIQNGIVFNVVKKEDLTHLNRSLDFENYNNEVAECVQIDCPGKEMDAASSTSEYGVDDSDSAATKSLCQNPEFNSMDNSGSDVGKDEIIVDG 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1414 951 Pfam Patatin-like phospholipase 349 541 IPR002641 GO:0006629
Glsi11g1414 951 MobiDBLite consensus disorder prediction 911 940 - -
Glsi11g1414 951 Pfam Domain of unknown function (DUF3336) 211 342 IPR021771 GO:0004806|GO:0006629
Glsi11g1414 951 Gene3D Cytosolic phospholipase A2 catalytic domain 425 607 - -
Glsi11g1414 951 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 149 687 - -
Glsi11g1414 951 Gene3D Cytosolic phospholipase A2 catalytic domain 338 424 - -
Glsi11g1414 951 CDD Pat_SDP1-like 279 686 - -
Glsi11g1414 951 MobiDBLite consensus disorder prediction 905 951 - -
Glsi11g1414 951 SUPERFAMILY FabD/lysophospholipase-like 345 691 IPR016035 -
Glsi11g1414 951 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 349 552 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1414 Glsi-ChrGlsi11 8852994 8859539 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g1414 118 908 Acyl Lipid Metabolism Gene Families AT5G04040 76.537 0.0 1246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2292 02 73309423 73312638 Glsi11g1414 11 8852994 8859539 CCT
Glsi11g1414 11 8852994 8859539 Glsi11g1414 11 8852994 8859539 ECH