Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2292 ATGGATATAAGTAATGAGGCTAATGTCAATCCTTTTTCAATTGGGCCTTCAAGCATTGTTGGACGAACAATTGCTTTCAGGATTCTTTTCAGCAAATCTATCTCACATTTGAGGCATCAAATATTTCGTGTATTGTTAAATCTCTTCTATAGATTTAGGGAATGTATAACACCCGTTATATCATGGTTGCATCCAAGAAACCCACAAGGGATATTAGCAATGATGGCAATAATTGCTTTCTTGTTGAAACGATACACAAATGTGAAAGTAAGGGCTGAAATGGCATATCGGAGGAAATTTTGGAGAAATATGATGCGATCTGCATTGGCCTACGAGGAGTGGGCTCATGCAGCTAAGATGCTTGATAAAGAGACACCAAAGATGAATGAATCAGACCTTTATGATGTAGAATTGGTGAGGAACAAGCTTCAAGAGCTCCACCACCGTCGTCAAAAGGGATCTCTTCGAGATATAATATTTTGTATGCGTGCTGATCTTGTTAGAAATCTAGGTAATATGTGCAACCCTGAGCTTCACAAAGGTAGGCTTCAGGTGCCCAAACTAATTAAGGAGTATATTGATGAGGTATCAACCCAGTTGAGGATGGTCTGTGACTCTGATTCTGAGGAGCCCTTATTGGAAGAGAAGCTTGCTTTCATGCATGAAACCAGGCATGCATTTGGGAGAACTGCTTTGCTGTTAAGCGGGGGTGCTTCTCTTGGATCTTTTCATGTGGGTGTAGTTAAAACATTGGTAGAACATAAACTCTTGCCTAGAATAATTGCTGGTTCAAGTGTTGGTTCCATTATGTGTGCTGTTGTTGCTACGAGGTCTTGGCCAGAGCTTCAAAGCTTTTTTGAGGATTCATGGCACTCATTGCAGTTTTTTGATCAGATGGGTGGGATTTTTGCAGTTGTCAAGAGGGTTATGACACAGGGCGCTGTTCACGAGATCAGACAGTTGCAAATGATGTTGAGGCATCTGACAAGCAACCTTACATTTCAAGAAGCTTATGACATGACGGGTAGAATTCTTGGAATCACTGTTTGCTCCCCAAGAAAGCACGAACCCCCTAGGTGTCTTAATTACTTGACTTCACCCCATGTTGTTATATGGAGTGCAGTCACCGCTTCTTGTGCCTTTCCTGGTCTTTTTGAGGCTCAGGAACTGATGGCAAAGGATAGAAGTGGAGAGATTGTTCCTTACCATCCTCCATTTAATTTAGGTCCTGAGGACGGCTCTACACCGGTGCGTCGTTGGAGAGATGGTAGCTTGGAGATTGACTTGCCTATGATGCAGTTGAAAGAGCTGTTCAATGTCAATCATTTCATTGTCAGTCAGGCCAACCCTCATATTGCTCCATTATTGAGATTGAAAGAATTTGTAAGAGCTTATGGAGGCAATTTTGCTGCCAAGCTTGCTCATCTTACGGAGATGGAGGTGAAACATAGATGCAATCAAATACTGGAACTTGGTTTTCCAATAGGTGGACTTGCCAAGCTGTTTGCTCAAGACTGGGAAGGTGATGTAACTATTGTTATGCCTGCAACTCTCGCTCAGTACTCAAAAATTATACAGAACCCTTCCTACGTGGAGCTCCAAAAGGCAGCCAACCAGGGGAGAAGGTGCACTTGGGAGAAGCTTTCAGCCATAAAAGCAAATTGTGCCATTGAGATTGCTCTTGATGAGTGTGTTGCAATGCTCAACCATATGAGAAGACTCAAAAGAAAATCTGAAAGAGCTGCTGCTTCTTCTCATGGTCTGGCCAGTACTGTTAAATTCAGTGCTTCAAGAAGAATCCCTTCATGGAATTGCATTGCAAGAGAGAACTCAACAGGTTCCCTTGAAGAAGACCTTTTAACAGATGTTGTTCCCTCATTGCATCAAGGAGGTGTTAGTGGTTCCAATGGAGCCACTGGTAAAAACTGGAAGACCCACCGTAGTATACATGATGGAAGTGACAGTGAATCTGAAAGTTTTGATTTGAATTCTTGGACACGATCTGGTGGGCCTCTGATGAGAACTACTTCAGCAAATATGTTCATTGACTTTGTCCAAAACTTAGATGCTGTTGATACTGAGCTAAATAGAGGCTTGGTGGCTCATCCTAACAGTAACTCCGCTCAGTATAATGACAGTTCAAGGGTGACAACACCAGATAGGAGCTCAGAGAGCACAGTGATGAGCGGATCTAGCATAATGGTAACTGAAGGTGATCTTTTGCAGCCTGAAAGGATAAATAATGGGATTTTGTTTAATGTTGTGAAGAAAGAAGAGTTAACAGCTAGGAGTCATGATTTTGAAAATTACAACCCTGAAGTTGCTGAATGTGTCGAAATTGACTGTCCAGGGAAGGAGACGGATGCTGCTAGTAGCTCAGCTTCTGAATGTGGAGATAATGATTCTGCAGCAGCCAACTCCTCTACTGAAGCACGTGATTTGAGTTCCCGCATGGATCATTCTGGCACTGATGTGAGTAAGGATCAGAGCATCTTGGACAGTTAA 2505 0.4255 MDISNEANVNPFSIGPSSIVGRTIAFRILFSKSISHLRHQIFRVLLNLFYRFRECITPVISWLHPRNPQGILAMMAIIAFLLKRYTNVKVRAEMAYRRKFWRNMMRSALAYEEWAHAAKMLDKETPKMNESDLYDVELVRNKLQELHHRRQKGSLRDIIFCMRADLVRNLGNMCNPELHKGRLQVPKLIKEYIDEVSTQLRMVCDSDSEEPLLEEKLAFMHETRHAFGRTALLLSGGASLGSFHVGVVKTLVEHKLLPRIIAGSSVGSIMCAVVATRSWPELQSFFEDSWHSLQFFDQMGGIFAVVKRVMTQGAVHEIRQLQMMLRHLTSNLTFQEAYDMTGRILGITVCSPRKHEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKDRSGEIVPYHPPFNLGPEDGSTPVRRWRDGSLEIDLPMMQLKELFNVNHFIVSQANPHIAPLLRLKEFVRAYGGNFAAKLAHLTEMEVKHRCNQILELGFPIGGLAKLFAQDWEGDVTIVMPATLAQYSKIIQNPSYVELQKAANQGRRCTWEKLSAIKANCAIEIALDECVAMLNHMRRLKRKSERAAASSHGLASTVKFSASRRIPSWNCIARENSTGSLEEDLLTDVVPSLHQGGVSGSNGATGKNWKTHRSIHDGSDSESESFDLNSWTRSGGPLMRTTSANMFIDFVQNLDAVDTELNRGLVAHPNSNSAQYNDSSRVTTPDRSSESTVMSGSSIMVTEGDLLQPERINNGILFNVVKKEELTARSHDFENYNPEVAECVEIDCPGKETDAASSSASECGDNDSAAANSSTEARDLSSRMDHSGTDVSKDQSILDS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2292 834 Pfam Patatin-like phospholipase 232 423 IPR002641 GO:0006629
Glsi02g2292 834 CDD Pat_SDP1-like 162 569 - -
Glsi02g2292 834 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 31 570 - -
Glsi02g2292 834 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 232 435 IPR002641 GO:0006629
Glsi02g2292 834 FunFam Triacylglycerol lipase SDP1 220 444 - -
Glsi02g2292 834 MobiDBLite consensus disorder prediction 702 730 - -
Glsi02g2292 834 MobiDBLite consensus disorder prediction 628 643 - -
Glsi02g2292 834 MobiDBLite consensus disorder prediction 788 812 - -
Glsi02g2292 834 Gene3D Cytosolic phospholipase A2 catalytic domain 220 308 - -
Glsi02g2292 834 Pfam Domain of unknown function (DUF3336) 94 225 IPR021771 GO:0004806|GO:0006629
Glsi02g2292 834 SUPERFAMILY FabD/lysophospholipase-like 228 574 IPR016035 -
Glsi02g2292 834 Gene3D Cytosolic phospholipase A2 catalytic domain 309 491 - -
Glsi02g2292 834 MobiDBLite consensus disorder prediction 627 662 - -
Glsi02g2292 834 MobiDBLite consensus disorder prediction 785 834 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2292 Glsi-ChrGlsi02 73309423 73312638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2292 1 793 Acyl Lipid Metabolism Gene Families AT5G04040 75.278 0.0 1239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2292 02 73309423 73312638 Glsi11g1414 11 8852994 8859539 CCT
Glsi02g2292 02 73309423 73312638 Glsi02g2292 02 73309423 73312638 ECH