Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1248 ATGCTGAGCGTGCTACGCGTGCACCTCCCCTCTGATATACCCATTGTAGGCTGTGAGCTCACGCCGTACGTGCTCCTACGGCGATTCGACACAACTTATACCACTGACGATGTCCCTGAGACGGCCCCTTTAGATGGTCATTTCTTGCGGTACAAGTGGTATCGTGTACAAAGTGATAGAAAGGTTGCTGTCTGTAGCGTTCATCCATCTGAGCAGGCCACACTGCAGTGCGTAGGTTGTGTTAAGGTGAAAATACCTGTTGCCAAAAGTTATCATTGCACCCCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTCTTTTACATGACCGTGCTGCTAGTGCAGTTAATGAAAATGGAACTGATGAGGAGGAGATATTTGGACGCTATAATAGTTCTGGATCTGGGGCATTGAATACCAGTTTATCTGGCTCTGCATCAAGTGCTAGCTTGGCAAATGTGTCAGCACCTTTGTATCCAGCAGCTATTACACAACGAAGTGGTGGAGAAACTTGGATTGAAGTGGGCCGATTTAAAACGTATACCCCAACAGCTGATGACGTTGGTCATGTCCTTAAATTTGAGTGTGTTGTAGTTGACACAGAGACAAAAGTTCCTGTGGGTCATGTTAACACTGTACTAACTTCTCGAGTTATTCCTGCTCCCTCTCCTAGTCCCCGCCGTTTGATTACTGTTGATGGGATGGGACATTTAGATGCAGATGGGCGCATAACATCTTCAGGAACCTTTACTGTTCTATCATACAACATTTTGTCTGATGCATACGCTTCAAATGATCTATACAATTACTGCCCTTCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGTTGAGAGAAATAGTTGGTTACCGTGCAGATATTATTTGTCTCCAGGAGGTACAAAGTGATCACTATGAGGAATTTTTTGCTCCGGAACTGGACAAGCATGGTTATTATGGTCTATACAAGAGAAAAACCAATGAGGTATATAGCGGCAACACCAATGCAGTTGATGGTTGCGCAACATTTTTTCGTAGAGACAGATTTTCGCATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCTTTGACAGATGCAATGATTCCCACAACTCAGAAGAAAACGGCATTGAATCGACTGGTTAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCAAAAGTTAACAACCAGCTAGTTGATAATCCTGGGAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTAAATGTTCAGCAGGATTTGAAAGATGTAAAACTCTGGCAGGTGCATACACTCTTAAAAGGGTTGGAGAAAATAGCGGCAAGTGCAGATATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCTCCTCATGCACTTCTTGCACTGGGGAAGGTAGATCAATCGCATCCAGATTTAGCAGTTGACCCACTTAATATCCTGCGACCTCACAGCAAGTTGGCTCATCAGTTGCCACTGGTTAGTGCTTACTCGTCCTTTGGAAGAACAGTAGGACTTGGATTAGAACAGCACAAAAGGAGACTGGACAGTGCAACAAATGAACCGTTATTCACTAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACGGCGGATTCATTGGTGACGTTAACACTTGAAGGTCAGATCCAAAGACACGTAAAGAAAGAGGCTGAAAGAAGCATTGGTTCATAA 1737 0.4318 MLSVLRVHLPSDIPIVGCELTPYVLLRRFDTTYTTDDVPETAPLDGHFLRYKWYRVQSDRKVAVCSVHPSEQATLQCVGCVKVKIPVAKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTDEEEIFGRYNSSGSGALNTSLSGSASSASLANVSAPLYPAAITQRSGGETWIEVGRFKTYTPTADDVGHVLKFECVVVDTETKVPVGHVNTVLTSRVIPAPSPSPRRLITVDGMGHLDADGRITSSGTFTVLSYNILSDAYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFAPELDKHGYYGLYKRKTNEVYSGNTNAVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQLVDNPGKRQLLCVANTHVNVQQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLALGKVDQSHPDLAVDPLNILRPHSKLAHQLPLVSAYSSFGRTVGLGLEQHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLVTLTLEGQIQRHVKKEAERSIGS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1248 578 Gene3D Endonuclease/exonuclease/phosphatase 219 574 IPR036691 -
Glsi11g1248 578 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 160 557 - -
Glsi11g1248 578 Pfam Endonuclease/Exonuclease/phosphatase family 253 563 IPR005135 GO:0003824
Glsi11g1248 578 CDD Deadenylase_CCR4 252 567 - -
Glsi11g1248 578 FunFam Carbon catabolite repressor protein 4 1 219 572 - -
Glsi11g1248 578 SUPERFAMILY DNase I-like 248 555 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1248 Glsi-ChrGlsi11 7856848 7864317 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2457 02 74572597 74577428 Glsi11g1248 11 7856848 7864317 CCT
Glsi11g1248 11 7856848 7864317 Glsi11g1248 11 7856848 7864317 ECH