Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2457 ATGCTGAGCGTGCTACGAGTGCACCTCCCCTCTGATATACCCATTGTAGGCTGTGAGCTCACGCCATACGTGCTCATACGGCGACCCGACAAGCCTCCTACCACCGAAGATGTGCCAGAGACGGCCCCATTAGACGGCCATTTCTTGCGGTACAAGTGGTATCGTGTACAAAGTGATAGAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCCACACTGCAGTGCCTGGGTTGTGTTAAGGCCAAAATACCTGTAGCAAAAAGTTACCATTGCACCCCAAAGTGTTTTTCAGATGCATGGCAACATCATCGTGTTCTACATGACCGTGCTGCTAGTGCAGTTAATGAAAATGGAAATGAAGAGGAGGAGGTATTCGGTCGCTTTAATAGTTCTGGGTCAGGGGTAATCAATAATAGCTTATCTGGCTCTGCATCAAGTGCTACCTTGACAAATGGGTCGGCACCTTTGTATCCAGCAGCTGTTACACAACGAAATGGTGGCGAAACCTGGTTTGAAGTTGGACGATCTAAAACATATACCCCAACAGTTGATGACATTGGCCATATCTTAAAATTTGAATGTGTGGTAGTTGATGCAGAGACAAAACTTCCTGTGGGGCATGTCAACACTATACTAACTTCTCGTGTCATTCCAGCCCCATCGCCTAGTCCACGCCGCTTAATACCTGTTGATGGGATGGGGCATTTAGATGCAGATGGACGCATAACATCTTCAGGGACTTTTACTGTTCTATCATACAACATTTTGTCTGATGCATATGCCTTGAATGATTTATACAGTTACTGCCCATCATGGGCTCTTTCTTGGCCATATCGTAGGCAAAATTTGTTAAGAGAAATAGTTGGATATCGTGCAGATATTATTTGTCTTCAGGAGGTTCAAAGTGACCATTATGACGAATTTTTTGCTCCTGAACTGGACAAACATGGCTATTACGGTTTATACAAGAGAAAAACAAATGAGGTATACAGCGTTACCAATATAATTGATGGTTGTGCAACATTCTTCCGCAGAGACAAATTTTCACATGTGAAGAAATATGAGGTTGAATTTAACAAGGCCGCACAGTCTTTGACAGATGCCATGATTCCAACCACTCAGAAGAAAACAGCTTTAAATCGGCTAGTTAAGGATAATGTTGCACTAATTGTTGTTTTAGAAGCAAAGGTTAACAATCAACCAGTTGATAATCCCGGGAAAAGACAGCTTCTTTGTGTGGCTAATACACATGTAAATGTCCACCAAGATTTAAAGGATGTCAAACTCTGGCAGGTGCATACTCTCTTAAAAGGTTTGGAGAAAATAGCTGCAAGTGCGGACATTCCAATGCTAGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCTCCTCATGCACTTCTTGCACTAGGAAAGGTAGATCCATTGCATCCAGATTTAGCAGTTGACCCACTTAATATCCTGCGCCCTTACAGCAAGTTGGTTCATCAGTTGCCGCTGGTTAGTGCTTACTCGTCCTTTGCAAGAACAGTAGGTCTTGGATTTGATCTGCATAAAAGGAGACTGGACAGCGCAACAAATGAACCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATCTTTTATACAGCGGATTCTTTGGTGGTGGAGTCATTATTGGAGCTATTGGATGAGGAGAGTTTGAGGAAAGACACAGCACTTCCTTCTCCTGAATGGTCCTCAGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAGAATAGATCTAGGCGTTGA 1800 0.4306 MLSVLRVHLPSDIPIVGCELTPYVLIRRPDKPPTTEDVPETAPLDGHFLRYKWYRVQSDRKVAVCSIHPSEQATLQCLGCVKAKIPVAKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNSSGSGVINNSLSGSASSATLTNGSAPLYPAAVTQRNGGETWFEVGRSKTYTPTVDDIGHILKFECVVVDAETKLPVGHVNTILTSRVIPAPSPSPRRLIPVDGMGHLDADGRITSSGTFTVLSYNILSDAYALNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYDEFFAPELDKHGYYGLYKRKTNEVYSVTNIIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPVDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLALGKVDPLHPDLAVDPLNILRPYSKLVHQLPLVSAYSSFARTVGLGFDLHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2457 599 Gene3D Endonuclease/exonuclease/phosphatase 220 598 IPR036691 -
Glsi02g2457 599 FunFam Carbon catabolite repressor protein 4 1 219 597 - -
Glsi02g2457 599 CDD Deadenylase_CCR4 252 592 - -
Glsi02g2457 599 SUPERFAMILY DNase I-like 246 593 IPR036691 -
Glsi02g2457 599 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 157 592 - -
Glsi02g2457 599 Pfam Endonuclease/Exonuclease/phosphatase family 253 583 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2457 Glsi-ChrGlsi02 74572597 74577428 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2457 02 74572597 74577428 Glsi11g1248 11 7856848 7864317 CCT
Glsi02g2457 02 74572597 74577428 Glsi02g2457 02 74572597 74577428 ECH