Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g1225 ATGGATATGGAAGCAGTACCATCTTCCAGGATGGTAAAATGTTGCAACTGTGGGTGTAGTTGTTCGTTGGCTGCTGAATCTTCAGGGACTTGGATTCGCTCTGTTAAACGAAAGCACGATGAATTTGAACGGGGTAACCAATTTTTTGTACCTGGCTTGGATAACTATTCAGTTGCACGGGTCCAAATTGAGAATGAATGTGCTGCATTGCGCGAGACAGTGGGAAGTCAACAGCAAACTATACAAGATTTATATGCTGAATTGGAAGAGGAGAGAAATGCTTCCTCAACGGCCGCAAATGAGGCCATGTCAATGATATTAAGGTTGCAGAGGGAAAAGGCAGAGATTCAAATGGAAGCCCGGCAGTTCAAGTCTTTTGTAGAGGAGAAGATGTCTCACGATCAGCAGGAAGTTTTAGCATTTGAGGATTTGTTGTATAAGAGAGAACAAACAATTCAGTCACTTACTTGTGAAGTCCAGGCTTATAAGCATAGGATGATGAGTTATGGGCTCACTGAGTCCGAAGCAGAGGGTGAGAGGGGTTTGGACGCTGAATATGAACCTCCCATGTATGACTACCCTCCATTGAAATGTAATAATGTAAATGAGATGCATGCTACTATGGAAGTAGATACTGATGACATAGGTGTTGAGAAATATGCATTTGGTGAAACCCCTCGTGATCGTTTGAGGAGTTTGGAAAATAGGATCTCTCAAATGGAAAGAAGTCCCACCTATAGCCAGGTGGATGGGGATCTTACAGGAAAAACTATTCTAGAGAAGGTCGTAGTTGGGCAGTCTCCAAGACGGACAAGACATTCCCGGAAATTTTCAAGTGATTCAAGTTCATTTGTTGGGATGGGTAGAGAGATGGGACCTGAATTCTGTATGGATTCTCCTAAGATCAGTACTGCCTTTAGGAAGACAGATATTTCACAGTCAGAGGATCCATCCAATTTGAAAAAGGTAGACAATGCATCAGAAGCTGGTGATGATTCAAGTGACAGAGTTTATACCATTGACTCTATCCATACTGGGGCACCATATAATGGTTTCAGAGAGTCCAAACCTGTATCTGGTGTTTATGAAGATTATGCAACCACTCCAAGGGGGTCCTTGAATCATGTTGTTGATTATGAAGATCCCGACTTAAAAAAGCTATACATGAGACTTCAGGCACTTGAGGCCGATAGGGAATCAATGAAGCAGACGATCATTTCAATGCGCACTGATAAAGCACAGATTGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGTCACCGCAAGGAAGAATAGCAGTGAGGAAGCCATCCGTTGCTGGCAGATTTTCGTCCTTGTCAATTTTTAAGTGCATCACATCAGTTCTTTTCTGGAGAAAGAAAGCTCGCCGGTGCAAGTATATCTTTGGGCAACCTGTTGACAACGCGGGCTTGCTAATACTTCTGGACAAAGGGGCTCGTGCTAGGCAATGGAGATGTCTTTCGAGCACACAATTGAGAGATTAG 1515 0.4304 MDMEAVPSSRMVKCCNCGCSCSLAAESSGTWIRSVKRKHDEFERGNQFFVPGLDNYSVARVQIENECAALRETVGSQQQTIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKSFVEEKMSHDQQEVLAFEDLLYKREQTIQSLTCEVQAYKHRMMSYGLTESEAEGERGLDAEYEPPMYDYPPLKCNNVNEMHATMEVDTDDIGVEKYAFGETPRDRLRSLENRISQMERSPTYSQVDGDLTGKTILEKVVVGQSPRRTRHSRKFSSDSSSFVGMGREMGPEFCMDSPKISTAFRKTDISQSEDPSNLKKVDNASEAGDDSSDRVYTIDSIHTGAPYNGFRESKPVSGVYEDYATTPRGSLNHVVDYEDPDLKKLYMRLQALEADRESMKQTIISMRTDKAQIVLLKEIAQHLCKEMSPQGRIAVRKPSVAGRFSSLSIFKCITSVLFWRKKARRCKYIFGQPVDNAGLLILLDKGARARQWRCLSSTQLRD 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g1225 504 Coils Coil 384 411 - -
Glsi11g1225 504 PANTHER BNAANNG28530D PROTEIN 63 442 - -
Glsi11g1225 504 MobiDBLite consensus disorder prediction 314 337 - -
Glsi11g1225 504 MobiDBLite consensus disorder prediction 308 337 - -
Glsi11g1225 504 Pfam Zein-binding 69 159 IPR007656 -
Glsi11g1225 504 Coils Coil 53 119 - -
Glsi11g1225 504 MobiDBLite consensus disorder prediction 265 284 - -
Glsi11g1225 504 ProSiteProfiles GTD-binding domain profile. 65 163 IPR007656 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g1225 Glsi-ChrGlsi11 7667069 7670186 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2490 02 74811678 74814334 Glsi11g1225 11 7667069 7670186 CCT
Glsi11g1225 11 7667069 7670186 Glsi11g1225 11 7667069 7670186 ECH