Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2490 ATGGATTCGGAAGCAGTTCCATCTTCCAGCAATTCGGTAAAATGCTACAACTGCGGGTGTAGTTGGTCGTTGGCAGCTGATTCTTCAGGAATTTGGCTTCGTTCTGTTAAACGGAAGTATGATGAGGTTGAACGGAATAACCGGTTCTCTATACCCGAGTTGCATTACTTTTCAGTTGCACGGGTCCAAATTGAAAATGAATGTGATGCATTACGTGAGACAGTTGCTAGTCAACAACAAGCTATTCAAGATCTGTACGCTGAATTGGAGGAGGAGAGAAATGCTTCATCAACGGCAGCAAATGAGGCCATGTCTATGATATTGAGGTTGCAGAGGGAGAAAGCAGAGATTCAAATGGAAGCTCGACAGTTCAAACGATTTGCAGAGGAGAAGACATCACACGATCAGCAGGAGATTTTATTATTAGAGGATTTGTTGTATAAGAGAGACCAGACAATTCAGGCTCTTACATGTGAAGTTCAGGCTTATAAGCACCGGATGATGAGTTACGGCCTCACCGAGTCCGAGGCTGCAGGTGAAAGTAACCAAAGCATGGGGGAGTTGGATGCTCAATATGACCTTCCCATCTATGATTACCCACCTTTAAAATGTAGTGTACATACTGCCATGGATGCCGATAATGATGACACAGATATTGAGAAATATGCATTTGGTGAAACTCCTTGCGACCGATTGAGGAACTTGGAAAATAGAATCTCTCAAATGGAGAAAAGTCCCAGTTATAACCAGGTGGACGGGGATTATATGGGGAAAAATATTCTGGAGAAGGTGGTAGTTGGACAGTCACCAATGCGAACTAGACATTCAAGAAAATTTTCAAATGACTCAAGTTCACTTGTTGGGATGGGTAGAGAAATGGGTCCCGAGTTTCTGATGGATTCTCCCAAGAGCTTTAGGAAGATGGATTATGTCTCACAACCAGAGGACCTTTCCAATTTGAGAAAGGTAGATTATGCATCAGAAGCAGGCGATGATACGAGTGACAGAGTTTATACTATTGACTCTGTTCATACTGGTGCTCCATACAAGGGTTTTCCAGAGTCCAAAGCTGGAGCTGCTACTTACGAAGATTATGCAACCTCTCCAATGGAGTCTCAGAATCATGCTGATTTTGAAGATCCTGACATAAAGAAGCTTTACATGAGACTTCAAGCTCTTGAAGCTGACAGGGAATCAATGAGGCAGACAATCATCTCAATGCGCACTGATAAAGCACAGCTTGTGTTACTGAAGGAAATAGCTCAACATTTGTGCAAAGAGATGCCACCGCAAAGAAGAATGACAGTGAGGAAGCCATCTATTGTTTGCACCTTTTCATTCTTGTCAATTTTTAAGTGGATCACATCGTTGGTTCTCTGGAGAAAGAAAGATGGTCAAAGCAAGTATATGTTTGGACTACCTGCCCACAGCATCGGCTTGCTAATGCTCCTGGACAATGGTCCCCACGTAAGGCCATGGAGATGTGTCTCAAGCACACAGGTGGGAGACTAG 1512 0.4339 MDSEAVPSSSNSVKCYNCGCSWSLAADSSGIWLRSVKRKYDEVERNNRFSIPELHYFSVARVQIENECDALRETVASQQQAIQDLYAELEEERNASSTAANEAMSMILRLQREKAEIQMEARQFKRFAEEKTSHDQQEILLLEDLLYKRDQTIQALTCEVQAYKHRMMSYGLTESEAAGESNQSMGELDAQYDLPIYDYPPLKCSVHTAMDADNDDTDIEKYAFGETPCDRLRNLENRISQMEKSPSYNQVDGDYMGKNILEKVVVGQSPMRTRHSRKFSNDSSSLVGMGREMGPEFLMDSPKSFRKMDYVSQPEDLSNLRKVDYASEAGDDTSDRVYTIDSVHTGAPYKGFPESKAGAATYEDYATSPMESQNHADFEDPDIKKLYMRLQALEADRESMRQTIISMRTDKAQLVLLKEIAQHLCKEMPPQRRMTVRKPSIVCTFSFLSIFKWITSLVLWRKKDGQSKYMFGLPAHSIGLLMLLDNGPHVRPWRCVSSTQVGD 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2490 503 Coils Coil 383 410 - -
Glsi02g2490 503 ProSiteProfiles GTD-binding domain profile. 66 164 IPR007656 -
Glsi02g2490 503 Pfam Zein-binding 70 160 IPR007656 -
Glsi02g2490 503 Coils Coil 61 130 - -
Glsi02g2490 503 PANTHER BNAANNG28530D PROTEIN 64 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2490 Glsi-ChrGlsi02 74811678 74814334 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2490 02 74811678 74814334 Glsi11g1225 11 7667069 7670186 CCT
Glsi02g2490 02 74811678 74814334 Glsi02g2490 02 74811678 74814334 ECH