Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0917 ATGGGGCAACTGGAAAGATCAAAGAAGAGAGTTCAGTTATGGAAGAAAGCCATTGTCCATTTTTTACTCTGTTTTGTGATGGGGTTCTTCACAGGCTTCGCTCCAACAGGTAAATCTTCAATATTTTCTGGACAGGCAGCTGCCTCAAATAGAACCAAATTTGCGCCGCAGCCAATTGAAATGTCTCACCGTACAACAAATTTCAATACAAGTTTGGGAGCTCCAACACCGGTGGCCATGCCGACAAGGTCCAGAGTTTCCAAACACAAAGCAAAGTTGCATGTAAAAACAGAGCCTGAGTTGAAGCCTAGAAGACTCATAATCATTGTCACTCCGACAAGCACAAAGCTTCCCTTTCAAGCAGTGTTTTTGAGAAGGTTGGCAAACACTATGAAGCTGGTTTCTCAACCATTGCTGTGGATTGTTGTGGAACCACCAACGGAATCCACACAAGTGTCGGAGATACTTAGGAAAACTGGCATCATGTATAGACATTTGGTTTCGAAGGAAAACTTCACGGAATTGGAAGCTGAACTGAATCACCAGAGGAATCTTGCTCTTAAGCACATTGAGCATCACAGGATAAGTGGGATCGTACACTTTGCTGGGCTATCCAATGTTTATGATCTCGAATTCTTCGACCAACTTAGAGATATTGAGGTGTTTGGGACATGGCCGGTGGCACTGTTAGCAGCAAACAGGAAGCAAGTAATAATCGAAGGGCCTGTTTGCGATTCTTCCCAAGTCATAGGTTGGCATCTGAGGAATATGAACAATGAAACTGATACAATAAGTGCCCCCCTTCATATTTCAAGTTTTGCATTCAATAGTTCCATTCTCTGGGACCCCGAAAGATGGGGTCGCACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTGGTAGAAGATGAATCAAAGTTGAAGGGGATTCCATCAGAGGGCTGCTCCAGAATCATGCTCTGGCGTTTAAAATTTCATGCTAGCACCACTTCAAATCATCATTTTTTAACTACTACCTCGGATAAATGA 1050 0.4314 MGQLERSKKRVQLWKKAIVHFLLCFVMGFFTGFAPTGKSSIFSGQAAASNRTKFAPQPIEMSHRTTNFNTSLGAPTPVAMPTRSRVSKHKAKLHVKTEPELKPRRLIIIVTPTSTKLPFQAVFLRRLANTMKLVSQPLLWIVVEPPTESTQVSEILRKTGIMYRHLVSKENFTELEAELNHQRNLALKHIEHHRISGIVHFAGLSNVYDLEFFDQLRDIEVFGTWPVALLAANRKQVIIEGPVCDSSQVIGWHLRNMNNETDTISAPLHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVVEDESKLKGIPSEGCSRIMLWRLKFHASTTSNHHFLTTTSDK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0917 349 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 343 IPR029044 -
Glsi11g0917 349 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 105 347 IPR029044 -
Glsi11g0917 349 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 337 IPR005027 GO:0015018|GO:0016020
Glsi11g0917 349 Pfam Glycosyltransferase family 43 127 331 IPR005027 GO:0015018|GO:0016020
Glsi11g0917 349 CDD GlcAT-I 105 332 IPR005027 GO:0015018|GO:0016020
Glsi11g0917 349 FunFam Glycosyltransferases 105 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0917 Glsi-ChrGlsi11 5749944 5751890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0917 1 336 Glycosyltransferase AT2G37090 59.195 3.95e-150 425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2833 02 77452241 77453668 Glsi11g0917 11 5749944 5751890 CCT
Glsi11g0917 11 5749944 5751890 Glsi11g0917 11 5749944 5751890 ECH