Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2833 ATGGGGTCAGTAGAAAGATCAAAGAAGAAAGCTCAAATATGGAAGAAAGCCATGGTCCATTTTTCTCTGTGTTTTGTAATGGGGTTCTTTACAGGCTTTACTCCAACAGTTAAATCTTCAATCTATTCCCGCCAAGTTGCTGCTGCCTCAAATAAATCAGAATTCGCACCACAGCCTATTCAAGTGTCGCACCAGACAACAAATGTTAACAGAAGTTTGATAGCTCCAACGAGATCCACACGCAAACCAAAACTGTATGCAAAACCAGAGCACAAGTTGAAACCTAGAAGACTCGTAATCATTGTCACTCCAACAAGCACCAAACTTCCCTTTCAAGCAGTGTTTTTGAGAAAGTTGGCAAATACTATAAGGCTAGTTCCTCAACCGTTGCTGTGGATTGTTGTGGAAGCACAAACGGAGTCCACAGAAATTTCGGAGATACTGAGAAAAACTGGCATCATGTATAGGCATTTGGTTTTCAAGGAAAACTTCACGGACTTGGAAGCTGAACTGAATTACCAGAGAAATCTTGCGCTTAAGCATATTGAGCACCACAGGCTAAGCGGGATTGTACATTTTGCTGGGCTTTCCAATGTCTATGATCTCCAATTTTTCCACCACCTTAGAGATGTTGAGATGTTTGGAGCATGGCCAATGGCACTGCTAAGAGCAAACAGGAAGAAAGTGATAATCAAAGGACCCGTATGCAATTCTTCGCTTGTTATAGGTTGGCATCTTAGGAACAAGAACAATGAAAAAGCTACCATTAGTCCTTCCATTCACATCTCAAGTTTTGCATTCAATAGCTCCATCCTGTGGGATCCTGAGAGATGGGGTCGCATTTCCTCTGTTCAAGATACCTCTCAGAATTCAATCAAGTTCGTGAAACAAGTAGTTCTAGAAGATGAGGCAAATTTGAAGGGAATCCCACCAGAGGATTGCTCCAAAATCATGCTCTGGCGGTTTAATTTTCATGCCGGTACCACTTTAAAACATTAA 999 0.4164 MGSVERSKKKAQIWKKAMVHFSLCFVMGFFTGFTPTVKSSIYSRQVAAASNKSEFAPQPIQVSHQTTNVNRSLIAPTRSTRKPKLYAKPEHKLKPRRLVIIVTPTSTKLPFQAVFLRKLANTIRLVPQPLLWIVVEAQTESTEISEILRKTGIMYRHLVFKENFTDLEAELNYQRNLALKHIEHHRLSGIVHFAGLSNVYDLQFFHHLRDVEMFGAWPMALLRANRKKVIIKGPVCNSSLVIGWHLRNKNNEKATISPSIHISSFAFNSSILWDPERWGRISSVQDTSQNSIKFVKQVVLEDEANLKGIPPEDCSKIMLWRFNFHAGTTLKH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2833 332 CDD GlcAT-I 97 324 IPR005027 GO:0015018|GO:0016020
Glsi02g2833 332 Pfam Glycosyltransferase family 43 119 323 IPR005027 GO:0015018|GO:0016020
Glsi02g2833 332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 97 326 IPR029044 -
Glsi02g2833 332 FunFam Glycosyltransferases 97 332 - -
Glsi02g2833 332 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 97 331 IPR029044 -
Glsi02g2833 332 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 324 IPR005027 GO:0015018|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2833 Glsi-ChrGlsi02 77452241 77453668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2833 1 330 Glycosyltransferase AT2G37090 60.571 1.58e-147 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2833 02 77452241 77453668 Glsi11g0917 11 5749944 5751890 CCT
Glsi02g2833 02 77452241 77453668 Glsi02g2833 02 77452241 77453668 ECH