Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0875 ATGTTCCCGTTCCGTCCATGCAAAGCCAGTGACACAGCACGAAAGAGTCAAGCGATACAGTCGAGGTTTCGGGATTCGAGTACAATATTTGTGCACACTGCAAAGTTTCGAGTTTCATGGTTTAAACTTCAAAGTCTGTTTTTGGTCTCCCAAAAGTTAAGAGGTTCTTTGGCGACTGACGAAATGAATGTGGTGGGTAAAGTTGGAAGCCTGATTACCCAAGGTGTCTACTCAGTTGCTACCCCTTTTCACCCCTTTGGTGGGGCTGTCGATGTGATTGTTGTTCAGCAGCAAGATGGGACATTTCGAAGCACACCATGGTATGTTCGTTTTGGTAAATTTCAAGGTGTTCTCAAAGGTGCTGAAAAGGTTGTCGGTATAAATGTTAATGGTGTTGAAGCAAACTTCCACATGTATCTTGATAATTCAGGGGAGGCTTATTTTGTAAAGGAGGTGGATGATGATAATGAGATGGAGTCAAATGGAATTGTTGAAGATTCTAATAACTCTGAATCTACTCGAGTGGAGAGTGGTATGGAAATTGATAACAAAAATAATAGTTATTTGAGTATTGATAGTACTCCTGGTCATAGATTTGATAGTGTCTCTGATTTAGGGGTGCTTAAGTTGAAAGATGAATGTGATTCTTCAGATATGCCTCTACTTCAAAGGGCAGAATCTGATAGTGATAGGAGATATTATGATTTCCAAGATGGGCAATCTTCTTTTGAAGGTTCAGTTGAGTTGTCAGATTATGGGTCAAATCTGTATGAGAGTCTAGATGGAGAAAATTATGTGGACTCACAGGGATCGCATCCAGAAGTGGTGTTAGTGAGTGTGGATGGTCATGTATTGATGGCCCCTATCTCAGAATTAGAGCAGAATATGGACAATGTGCAGTTAATAACTCCTCAGTTCCATCTGGGCCCAGGGGAAGGGACTGAGTTTTGTGAAGGCAACGTGGAGTTTTGTTCTGGCGAAAATGCTTGGGCTGCTGATTATATAAGTCAGCTGGATGCTTCAGCTGCTGATGTTCCAACCAGTGGCCATTGCAACACTAATGGTGATGATAAAGTTTCTGTGCTCCAGCAGGAGGTTCTTGAGGAAGAGGAGGTACATACTTTTCAGGCGCAAGAAACCTTGAGGAATGAAAGTCAAGAAGAAGGTCTTCATATTAAAAATGATTCAGTAGAGGTTGTAACTGGTATAAAGAGGGAAAGTGTTTTCGAAAGCTGTTTAGAGCTACAAGAATTTGCTCAGCAGGTTGGAAATGCTGATTTACTAGGTGCAGGTTCCTCATTTGGGGCTCATAATTCAGCAGAGAAAGTTAACGTACAATGTCCAGTCGTTGATGAAAATGAGCAAGGGAGCCTTGCTCAATCTAAATACAATGACAAGTTATCTCATTCTGATGCGTCTGCTTCTTCTGATGGCCATATTTCTCCAGAATTAAGACTCCAAGAGGTTGAGAACGATGCACCAGGGGAAGTAGACACTGATTCTGGCAGTCATTTTGTTACTAATGATACTGACACGAATGATGAACATATTGGCAAATCAGCATCAATTGAAGGGGTAGATGATGTTCGACAAACCCCTGCACTTGAAGATGATAGCAATGAAAGTGGGGTGGTTGAACCTCAAACTGCAATATCCAATGAAGGGGGTCAAAGTCATTCAGGATTAGATATCTCACTTTGTGGCCATGAACTTAAGGTGGGTATGGGTTTGGTTGCTGCTGCTGAAGTGTTTGAAGCACATCGGATATCCGCAGAGGAATTTAAAGTTTCTGCACCATCCATAATTAAAAATGAAAATCTCATCATAAAGATTAAAGAGAGGTACTTGCCATGGGAAAAGGCTGCTCCTCTTGTTCTTGGAACGGCTGTGTTTGGTTTAGATTTACCTGTTGAGCCCAAAGATACAATTCCTGTGGAACAGGATGATGCACTGAAGTCCAAAGACAATGTTCCTGGATCTGCTTGGTCTGGACGCAGATGGAGACTCTGGCCTATTCCTTTTCGAAAAGTCAAAACAATTGAGCACACCAGTAGCAACTCATCAACTGAGGAGGTATTTGTAGATTCTGAGTCTGGTTTGCAGAATTCTCTGGTAGAGCCTACTCAAACATCCAGCAGCCTCAGATCGCCTCACAAGCAGTTAATAAGGACAAATGTACCCACTAATGATCAGATAGCTTCTTTGAAACTGAATGAAGGTCAAAATTTGGTGACCTTCAGTTTCTCTACGAGGGTTCTCGGAAAACAACAGGTTGATGCTCATATATACTTGTGGAAGTGGAATGCAAGAATTGTAATTTCGGATGTTGATGGAACTATTACCAAGTCTGATGTTTTGGGACAGTTCATGCCTTTAGTTGGTAAAGATTGGACACAATCTGGAGTGGCAAGGCTTTTCTCTGCCATTAAGGAAAATGGATATCAGCTATTGTTTCTGAGTGCCCGTGCAATTGTCCAGGCATATCTTACCAGGAGCTTTTTGCTCAACGTGAAACAGGATGGAAAAACGTTGCCAAATGGACCTGTGGTTATTTCGCCTGATGGATTATTTCCATCACTTTTCCGAGAAGTAATAAGAAGAGCACCTCATGAGTTCAAGATCGCTTGTCTAGAGGATATTAAAAAACTTTTCCCTGCTGACTATAATCCATTCTATGCGGGATTTGGCAATAGAGACACAGATGAACTTAGTTACAGGAAGATTGGAATTCCAAAGGGAAAAATATTTATTATTAACCCCAAGGGCGAGGTTGCTATAAGTCATCGCATTGATGTGAAATCATATACATCATTACACACCCTTGTCAATGACATGTTTCCCCCTACTTGTTTGGTTGAGCAGGAAGACTACAACTCATGGAATTACTGGAAAATGCCATTGCCAGATATTGATTACAAGTTGAGGGGGGACATTATGAACTACGGTGGCCATGCCCTTCCATTCCTTCTTTTTGATCTTCACTGA 2985 0.4154 MFPFRPCKASDTARKSQAIQSRFRDSSTIFVHTAKFRVSWFKLQSLFLVSQKLRGSLATDEMNVVGKVGSLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRSTPWYVRFGKFQGVLKGAEKVVGINVNGVEANFHMYLDNSGEAYFVKEVDDDNEMESNGIVEDSNNSESTRVESGMEIDNKNNSYLSIDSTPGHRFDSVSDLGVLKLKDECDSSDMPLLQRAESDSDRRYYDFQDGQSSFEGSVELSDYGSNLYESLDGENYVDSQGSHPEVVLVSVDGHVLMAPISELEQNMDNVQLITPQFHLGPGEGTEFCEGNVEFCSGENAWAADYISQLDASAADVPTSGHCNTNGDDKVSVLQQEVLEEEEVHTFQAQETLRNESQEEGLHIKNDSVEVVTGIKRESVFESCLELQEFAQQVGNADLLGAGSSFGAHNSAEKVNVQCPVVDENEQGSLAQSKYNDKLSHSDASASSDGHISPELRLQEVENDAPGEVDTDSGSHFVTNDTDTNDEHIGKSASIEGVDDVRQTPALEDDSNESGVVEPQTAISNEGGQSHSGLDISLCGHELKVGMGLVAAAEVFEAHRISAEEFKVSAPSIIKNENLIIKIKERYLPWEKAAPLVLGTAVFGLDLPVEPKDTIPVEQDDALKSKDNVPGSAWSGRRWRLWPIPFRKVKTIEHTSSNSSTEEVFVDSESGLQNSLVEPTQTSSSLRSPHKQLIRTNVPTNDQIASLKLNEGQNLVTFSFSTRVLGKQQVDAHIYLWKWNARIVISDVDGTITKSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRSFLLNVKQDGKTLPNGPVVISPDGLFPSLFREVIRRAPHEFKIACLEDIKKLFPADYNPFYAGFGNRDTDELSYRKIGIPKGKIFIINPKGEVAISHRIDVKSYTSLHTLVNDMFPPTCLVEQEDYNSWNYWKMPLPDIDYKLRGDIMNYGGHALPFLLFDLH 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0875 994 SMART lns2 771 927 IPR031315 -
Glsi11g0875 994 SUPERFAMILY HAD-like 763 913 IPR036412 -
Glsi11g0875 994 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 563 647 IPR031703 -
Glsi11g0875 994 Pfam LNS2 (Lipin/Ned1/Smp2) 725 947 IPR013209 -
Glsi11g0875 994 MobiDBLite consensus disorder prediction 463 477 - -
Glsi11g0875 994 MobiDBLite consensus disorder prediction 463 482 - -
Glsi11g0875 994 PANTHER LIPIN 62 971 IPR026058 -
Glsi11g0875 994 MobiDBLite consensus disorder prediction 509 523 - -
Glsi11g0875 994 Pfam lipin, N-terminal conserved region 62 158 IPR007651 -
Glsi11g0875 994 MobiDBLite consensus disorder prediction 536 558 - -
Glsi11g0875 994 MobiDBLite consensus disorder prediction 492 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0875 Glsi-ChrGlsi11 5518185 5524838 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2889 02 77942607 77949341 Glsi11g0875 11 5518185 5524838 CCT
Glsi11g0875 11 5518185 5524838 Glsi11g0875 11 5518185 5524838 ECH