Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2889 ATGGAGGACCCTGACCCAACAATGAAATTGTCCCGAAAATTTCAAGGTTGCTTTGCGTATTATTGGAAATGGGATCTGACTCCGGCCTCGCGCATTAGCTTTTCATTGGCAACTGGCCAAATGAATGTGGTAGGCAAAGTTGGAAACCTGATTACCCAAGGTGTTTACTCAGTTGCTACCCCTTTTCATCCCTTTGGTGGGGCTGTTGATGTGATTGTTGTTCAGCAACAAGATGGCACATTTCGAACCACACCTTGGTATGTCCGTTTTGGTAAATTCCAGGGTGTCCTTAAAGGTGCTGAAAAGATTGTCCATATAAACGTCAATGGCGTTGAAGCAAACTTCCACATGTATCTTGACAATTCAGGGGAAGCCTACTTTGTAAAGGAGGTGGACGATGATAAAGGAATTCAGCCAAATGGGGTGGTTAAAGATTCTAAAAACTCTGAATTTAGTCGAGATGACAGTGATATGGATATTGATAACAAAAGTAATAGTTATCTGAGTGTTGATAATGTTTGTGGCAATAGACTAAATCATAGCATCTCTGATTCGGGGTTGCTTCAGTTTAGAGATGAAGACGATTCCTCAGGTGTGCCTCGTATGCAAAGGGCAGAATCTGATGTTGATCACAGATATTTAGAATTCCAAGACAAGCAATCTTCTTTTGAAGATTCAGTTGAGTTGTCAGAATATGGATCTAATCAATATGAGTGTTTAGATGGAGAAAAAGTTGTAGAACCACAAGGTTCCCATCCAGAGGTTGTCTTGGTAAGTGTAGATGGTCACATATTGACGGCCCCTATTTCTGAATCAGAGCAGAATACAGAGAATTTGCAGTTCGGAACTCCTCAATTTCATCTGGGCCCAGGGGAAGGGACTGACTTTTGTGAAGGCAATGAGGAGTTTAGTTCTGGTGAAAATGGTTGGGCTTCCAATTGTATAAGTCAGCTGGATGCTTCAACAGCTGATGTTCCATCCAGTAGTTGTTGCAACACTAGTGGTGATGATCAAGTTTCTGGGCTCCAGCTGGGAGTTAGTCAAGGAAAGGAGGGCCATATTTGTCAACCAGAGGAAACTTTGAGGATTAAAAACCAAGAAGAATATCATCTTATGCATATTGGTTCAGTAGAGGTTTCATCCAGTATCAAGAGGAGGAATGTTTTTAAAAGTTGTTTGGGGCCGCAAGAATTTACTCAACAGGTTGGAAATGCTGATTTACCAGATCTAGGTTCCCCATTGGAGGTTCAAAATTTAACAGAGGAATCTAATGCAAATTGTCCTGTAGTTTATGAAAATGGACAAGGGACAATTGTACTGTCTAAAAACATCAACAAGTTATCTTCCTCTAGTGGTTTTGCTTCTCCTGATGGCAACAGATCTCCGAGTGTAAAATTAAGACTTCAAGAGGTTGAGAAAAAAGCATTACTTGAAGAGGTAGATGATAGTAAACCAACCCCTGCACTTGAAAAAGACAGTAACAAAAGTGACATCATGGAACCTCAAACAGAAACTTCCAATGAAAGGGATCAAAGTCGTTCAGCATTTGAGATTTCACTTTGTGGTCACAAACTTAAGGCAGGTATGGGCGTAATTGCTGCTAAGGAGGTGTTTGAAGCAAATAGAATATCTGCAGAGACATTCAGAATTTCTGCACCATCAATAATTAAGAATGAAAATCTCATTATTAAGTTTAGAGAGAGGTACTTGGCATGGGTAAAGGCCGCTCCCTTTGTTCTTGGAATGGCTGCATTTGATTTAGATATACCCATTGAGCCCAAAGATGCAATTCCTGTGGAACAGAATGATGCACTGAAGTCCAGGGACAATGATCCCGGATGTGCTTCGCCTGGACGCAGATGGAGACTCTGGCCTATTCCTTTTCGAAAAGTCAAAACACTAGAACGCAGTAATAGTAGCTCATCAATTGAGGAGGTATTTGTAGATTCTGAATCTGGTTTTCTAAATTCTCCTGTAGAACCGACTTCAACATTCAGCAGCTATGGATCTCCTCACAAGCATTTGAAAAGGACAAATGTTCCTACTAATAATCAGATAGCATCTTTAAATCTGACTGAAGGTCAAAATTTGGTGACCTTCAGCTTCTCTACCAGGGTTCTTGGAACACAACAGTTGGAAACCTTGTGGTTGAATTATGCTAAGCATATGTCATCTGCTTCTATCGTTAATTCATTTCATCCTCCTAGTGATCTTTTGTCAATGTTGTTTTTGCTGTCTGACGTTTTGGGGCAGTTCATGCCTTTAGTTGGCAAAGATTGGACACAATCTGGTGTGGCCAGGCTTTTCTCTGCCATTAAGGAAAATGGATATCAGCTACTGTTTCTGAGTGCCCGGGCAATTGTCCAGGCATATTTAACCAGGAGATTTTTGCTTAATCTGAAACAGGATGGAAAAACTTTACCAAATGGACCTGTTGTTATTTCACCTGATGGATTATTTCCCTCACTTTACCGAGAAGGTGAGGAGGCACTTTTAAAGTAA 2502 0.4077 MEDPDPTMKLSRKFQGCFAYYWKWDLTPASRISFSLATGQMNVVGKVGNLITQGVYSVATPFHPFGGAVDVIVVQQQDGTFRTTPWYVRFGKFQGVLKGAEKIVHINVNGVEANFHMYLDNSGEAYFVKEVDDDKGIQPNGVVKDSKNSEFSRDDSDMDIDNKSNSYLSVDNVCGNRLNHSISDSGLLQFRDEDDSSGVPRMQRAESDVDHRYLEFQDKQSSFEDSVELSEYGSNQYECLDGEKVVEPQGSHPEVVLVSVDGHILTAPISESEQNTENLQFGTPQFHLGPGEGTDFCEGNEEFSSGENGWASNCISQLDASTADVPSSSCCNTSGDDQVSGLQLGVSQGKEGHICQPEETLRIKNQEEYHLMHIGSVEVSSSIKRRNVFKSCLGPQEFTQQVGNADLPDLGSPLEVQNLTEESNANCPVVYENGQGTIVLSKNINKLSSSSGFASPDGNRSPSVKLRLQEVEKKALLEEVDDSKPTPALEKDSNKSDIMEPQTETSNERDQSRSAFEISLCGHKLKAGMGVIAAKEVFEANRISAETFRISAPSIIKNENLIIKFRERYLAWVKAAPFVLGMAAFDLDIPIEPKDAIPVEQNDALKSRDNDPGCASPGRRWRLWPIPFRKVKTLERSNSSSSIEEVFVDSESGFLNSPVEPTSTFSSYGSPHKHLKRTNVPTNNQIASLNLTEGQNLVTFSFSTRVLGTQQLETLWLNYAKHMSSASIVNSFHPPSDLLSMLFLLSDVLGQFMPLVGKDWTQSGVARLFSAIKENGYQLLFLSARAIVQAYLTRRFLLNLKQDGKTLPNGPVVISPDGLFPSLYREGEEALLK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2889 833 Pfam LNS2 (Lipin/Ned1/Smp2) 679 826 IPR013209 -
Glsi02g2889 833 Pfam lipin, N-terminal conserved region 41 137 IPR007651 -
Glsi02g2889 833 MobiDBLite consensus disorder prediction 476 513 - -
Glsi02g2889 833 SMART lns2 746 833 IPR031315 -
Glsi02g2889 833 Pfam Lipin/Ned1/Smp2 multi-domain protein middle domain 516 601 IPR031703 -
Glsi02g2889 833 PANTHER LIPIN 41 713 IPR026058 -
Glsi02g2889 833 MobiDBLite consensus disorder prediction 476 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2889 Glsi-ChrGlsi02 77942607 77949341 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2889 02 77942607 77949341 Glsi11g0875 11 5518185 5524838 CCT