Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0812 ATGCAATTTTACCATTTGCACATACGGATAGATTTTTCTCGTCTTTCTGAGTGTGCCACTCTTTTATGTGCTGAGTTGAGAACCAATCCAGTAACACTTCGTCCAGATCTGAACTCGCTCGCATTGGATCCAACCCCTCTCCGGAATTCAGCGATGGAGGAAGCGCTGGAACTTGCACGCGCCAAGGACACTAAGGAGAGGATGGCCGGTGTGGAGCGACTTTATCAACTCTTGGAAGCTTCCAGAAGGAGCCTCACTTCATCTGAGATTACTTCACTTCTCGATTGTTGCTTGGATCTCTTGAAAGATAACAACTTCAAGGTCTCTCAGGGTGCTCTTCAAGCTTTGGCCTCTGCTGCCGTGCTTTCCGGCGAACATTTCAAACTTCACTTCAATGCGCTTGTTCCCGCCGTCGTCGACCGCTTAGGCGATTCCAAACAGCCTGTTCGTGACGCCGCCAGAAGACTCTTGCTCACTCTTATGGAGGTTTCTTCCCCTACAATAATTGTTGAAAGAGCAGGATCCTTTGCTTGGAGGAACAAAAGCTGGAGAGTCAGAGAGGAATTTGCACGAACTGTCACATCTGCAATTGGTCTATTTGCATCCACTGAACTTACCCTTCAACGGGCTATTCTTCCTTCAATTTTGCAGTTGCTGAATGATCCAAATCCTGGTGTTAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCGCAAGCTGGTCCTCAGTTTCGCGATGAACTTCAGCGCCACAACCTTCCTTCGTCCTTGGTGAAAGATATTAATGCTAGGCTAGAGGGCATTCAACCAAAAGTTCGTTCTTCAGATGGTATTCCAGGTGTTTTTGTTACTGGAGATACTAAGCCTTTGAGCTTTAATTCCAAGAGAAGTAGTCCAAAAGCTAAAAGTTCATCGAGGGAGAATTCTCTCTTTGGAGGAGAAGGTGATGTCACAGTAAAACCCATAGAATCTATCAAGGTGTACTCAGAGAAGGAGTTAATCAGGGAAATTGAAAAGATTGCATCTACCCTTGTACCAGAAAAGGACTGGTCAATCCGTATTGCTGCTATGCAGAGAGTTGAAGGTCTTGTTTTGGGAGGTGCTGCTGACTATCCATGTTTTCGGGGACTCCTGAAGCAGCTTGTTGGACCTTTGAGCACACAATTGTCAGATCGAAGGTCTACCATTGTGAAGCAGACTTGCCATCTATTGTGCTTTTTGTCGAAGGAACTTTTAGGTGATTTTGAAGCTTGTGCTGAAATGTTCATACCGGTCCTTTTCAAGTTGGTTGTGATTACTGTACTTGTAATTGCAGAGTCTGCGGACAACTGCATAAAGACGATGTTGCGAAACTGCAAAGTTGCTCGTGTGCTTCCACGTATAGTTGATTGTGCAAAAAATGATCGCAGTGCAATACTTCGTGCTAGGTGTTGTGAATACACACTTTTGATAGTAGAACATTGGCCTGATGCACCAGAAATACAGCGATCAGCCGATTTGTATGAGGATCTGATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGTTACAGAATGTTCGCCAAAACTTGGCCTGAGCGTTCTCGTCGCCTATTTTCTTCCTTTGACCCAGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCACCATCCATTCGTGACAGAGGTGCACTGATGTCATTAAGTAGCCAAGCCTCTGCTCCAAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGAAGTTCAAGTTTATCTTCAGGGACATCTGTCTCCTCTGGTGTACTTCTTTCACAAGCAAAGTCACATGGTAAAGGTACAGAACGTAGTTTGGAAAGCATGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGCATGCTTAGAGGTTTGGATTTGTCTGATAAGCGTAATTCTTCTGCTCTCCGGTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCATCTGACAAACACTTTAACAACAGAATCAACCATTTCTGGTAACAATAAAGGTAGTAACCGAAATGGTGGTTTGGGTTTGTCTGACATAATTTCACAAATTCAAGCTTCCAAAAACTCTAAGCTATCACATCAAAGTAATGCTAGTATTGAGCCTTTATCAGCACTTTCATCATACTCAAGTAAAATGGCTTCTGAAAGATCACAAGAAAGAAGTTCCATTGATGACAACGGTGACATTAGGGAGACTAGGCGGTTTGTGAACCCCCATATTGATAGGCAGTATTTGGATACACCTTATAGAGATGGAAACTTTAGGGATTCTCAAAATAGCTGTGTGCCTAATTTCCAGAGGCCACTATTGAGAAAGAATGTAGCTGGACGGATGTCTGCTGGCAGGAGAAGTTTTGATGATAGCCAGCATTCTCTTGGAGATATGTCAAATTATGCAGATGGACCGGCATCTCTCCATGAAGCTCTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCCTTGTTGCAGCAAGGTCCAAAGGGAATTCAAGAAGTGGTCCAGAATTTTGAGAAGGTAATGAAGTTGTTTTTCCAGCACTTGGATGATCCCCACCATAAAATTGCACAGGCTGCTCTTTCAGCACTTGGAGATATTATTCCAGCATGCCGAAAGCCCTTTGAGACTTACATGGAAAGAATATTACCCCATGTATTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTAGGCAGCCATGTTCAACAACCTTGGAAGTTGTTAGCAAAACTTACAGTATAGATTCTCTCTTACCAGCATTACTACGCTCACTTGATGAACAAAGGTCTCCGAAGGCGAAATTGGCTGTTGTTGAGTTTGCAATCAGTTCCTTTAACAAGCATTCAATTAATCCAGAAGGTGCTGCTAATCCTGGCATTCTGAAATCTTGGCTTGCCAAGTTAGCTCCCTTGGTTCATGACAAAAATACAAAGCTTAAAGAAGCTGCCATTACTTGCATTATATCAGTATACTCTCACTTTGATTCTTCTGCACTTCTGAATTTCATTCTTAGTTTGTCAGTTGAAGAACAAAATTCAATGAGACGAGCCCTTAAACAGTACACTCCTCGCATTGAAGTGGATCTAATTAACTATATGCAGAGCAAGAAAGAGCGACAGCGTTCTAAGTTTTCATATGATCCATCTGATGTTGTTGGGACATCCTCTGAAGAGGGATATGTTGGTTTTTCAAGGAAAGCTAATTACCTTGGAAGGTATTCTGCTGGTTCTCTCAATAGTGATGGTGGTAGGAAGTGGAGTTCCCAAGATTCAACCCTAATTAAAGCAAGTCTTTGCCAAGTAGTTTCTGGTGAAACTCAGGAACATTCATATCAAAATCTTGAAACTGATTGTAGTAGTGGCATTCTTGGTTCAAAAACTAAGGTTGTTCCTTATGCAGCCAATCCAATGGACCAAAATTTTGGCTCTCATGCTAGCCAACTTGCACATTCAGATAGTAGCATGAACTTTGAAGGTCTGTCAACTCCTCATCTGGATGTTAATGGTCAGATGTCCTTGGACCATTTAAATGTTGTTGAAGGCTTTGGACATGAAAAAGAACATCCTTCTGAATTGGACCTTGATCATCACTCAGCCAGAGCTGTGAAGATTAACTCCATGAAAGACACAGAGCCTGGCATTCCTCAAATTCTTCATATGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGTAAGCGGATTGCTCTTCAGCAGTTGGTTGAAGCTTCTATAGAAAATGATCATTCTATTTGGACTACGTACTTCAATCAGATTCTGACAATTGTGCTTGAGGTGTTGGATGAATCAGACACCCCAGTTAGAGAGCTTGCTCTTTCGCTAATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAGATTCAGTTGAGATTGTAATTGAGAAGCTGCTTCATGTTACCAAAGATACTGTTCCCAAAGTGTCAAATGAAGCAGAGCACTGCCTGACTATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACTGAGGACGAGAAAACTCTTGTTGCTTGCATAAATTGCTTGACAAAGCTTGTTGGCCGGCTGTCTCAGGAGGAATTGATGGTTCAGTTACCCTCTTTTCTGCCTGCTCTTTTTGAAGCTTTTGGAAACCAGAGTGCAGACGTTCGCAAGACCGTTGTATTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTACCCTACTTGCAAGGGCTTAACAGCACACAGTTAAAGTTGGTTACCATTTATGCAAATCGTATCTCACAAGCCAGGACAGGCACGCCAATCGATGCAACTCGTAGTTAG 4485 0.4261 MQFYHLHIRIDFSRLSECATLLCAELRTNPVTLRPDLNSLALDPTPLRNSAMEEALELARAKDTKERMAGVERLYQLLEASRRSLTSSEITSLLDCCLDLLKDNNFKVSQGALQALASAAVLSGEHFKLHFNALVPAVVDRLGDSKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWRNKSWRVREEFARTVTSAIGLFASTELTLQRAILPSILQLLNDPNPGVREAAILCIEEMYAQAGPQFRDELQRHNLPSSLVKDINARLEGIQPKVRSSDGIPGVFVTGDTKPLSFNSKRSSPKAKSSSRENSLFGGEGDVTVKPIESIKVYSEKELIREIEKIASTLVPEKDWSIRIAAMQRVEGLVLGGAADYPCFRGLLKQLVGPLSTQLSDRRSTIVKQTCHLLCFLSKELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKNDRSAILRARCCEYTLLIVEHWPDAPEIQRSADLYEDLIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLSSQASAPNLPGYGTSAIVAMDRSSSLSSGTSVSSGVLLSQAKSHGKGTERSLESMLHASKQKVTAIESMLRGLDLSDKRNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNTLTTESTISGNNKGSNRNGGLGLSDIISQIQASKNSKLSHQSNASIEPLSALSSYSSKMASERSQERSSIDDNGDIRETRRFVNPHIDRQYLDTPYRDGNFRDSQNSCVPNFQRPLLRKNVAGRMSAGRRSFDDSQHSLGDMSNYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKIAQAALSALGDIIPACRKPFETYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVVEFAISSFNKHSINPEGAANPGILKSWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSALLNFILSLSVEEQNSMRRALKQYTPRIEVDLINYMQSKKERQRSKFSYDPSDVVGTSSEEGYVGFSRKANYLGRYSAGSLNSDGGRKWSSQDSTLIKASLCQVVSGETQEHSYQNLETDCSSGILGSKTKVVPYAANPMDQNFGSHASQLAHSDSSMNFEGLSTPHLDVNGQMSLDHLNVVEGFGHEKEHPSELDLDHHSARAVKINSMKDTEPGIPQILHMICSGGDGSPISSKRIALQQLVEASIENDHSIWTTYFNQILTIVLEVLDESDTPVRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDTVPKVSNEAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVACINCLTKLVGRLSQEELMVQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGTPIDATRS 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 755 787 - -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 662 687 - -
Glsi11g0812 1494 SUPERFAMILY ARM repeat 48 453 IPR016024 -
Glsi11g0812 1494 Coils Coil 61 81 - -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 814 836 - -
Glsi11g0812 1494 SMART TOG_3 333 565 IPR034085 -
Glsi11g0812 1494 SMART TOG_3 1250 1486 IPR034085 -
Glsi11g0812 1494 SMART TOG_3 36 275 IPR034085 -
Glsi11g0812 1494 SMART TOG_3 829 1078 IPR034085 -
Glsi11g0812 1494 FunFam Protein peg1 317 564 - -
Glsi11g0812 1494 SUPERFAMILY ARM repeat 340 1484 IPR016024 -
Glsi11g0812 1494 ProSiteProfiles HEAT repeat profile. 134 172 IPR021133 -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 290 312 - -
Glsi11g0812 1494 Pfam CLASP N terminal 851 1045 IPR024395 -
Glsi11g0812 1494 Pfam CLASP N terminal 335 551 IPR024395 -
Glsi11g0812 1494 Pfam CLASP N terminal 108 239 IPR024395 -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 747 798 - -
Glsi11g0812 1494 Gene3D - 1277 1485 IPR011989 -
Glsi11g0812 1494 Gene3D - 47 272 IPR011989 -
Glsi11g0812 1494 ProSiteProfiles HEAT repeat profile. 211 249 IPR021133 -
Glsi11g0812 1494 Coils Coil 1330 1350 - -
Glsi11g0812 1494 PANTHER CLASP 84 1480 - -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 692 711 - -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 290 313 - -
Glsi11g0812 1494 Gene3D - 845 1069 IPR011989 -
Glsi11g0812 1494 MobiDBLite consensus disorder prediction 613 632 - -
Glsi11g0812 1494 Gene3D - 318 557 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0812 Glsi-ChrGlsi11 5124387 5141577 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2951 02 78280831 78304748 Glsi11g0812 11 5124387 5141577 CCT
Glsi11g0812 11 5124387 5141577 Glsi11g0812 11 5124387 5141577 ECH