Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g2951 ATGGCACTGCTTCTTTCTCCCAAATACTCTCTCATTCCACGAGAGCAAGAAGAAAAGGGGAGATTGAAGAATATCCTTAATCTCGAGAAAAGAAAAATGGCTTCTTCAATAATTTTGGAGATAGAGTTGATCTCTGTTTCTCCTTCCTCATTTGCTTCCACTCTCCCCCGATATGATATCAACAATATTGATCCATCTGCTTCTCACTTTTCCTCTTGTAGTTCACCCGGCAATAAGCTAGTATCCAGAGAGAAGGCTACTTTAAATAAAATCATAATGTCAAAGTGGAGAGTGTTGCTGGCCATCTTGGTGGTGGCACAGATTGGAGTGGCTCCAGAGAAAGCAGAGGGAGCTCGTGCTTTCTTCGTGTTTGGGGACTCACTGGTTGACAGTGGTAACAACAATTACTTAGTAACCACGGCACGAGCAGACTCTCCCCCCTACGGCATCGACTATCCTACCCATCGCCCCACTGGCCGCTTCTCCAATGGCTTCAACCTCCCTGACATCATCAGCCAGCAAATTGGGTCTGAACCCACATTGCCATATTTGAACCCTGAACTTAATGGACAAAAGCTCTTGGTTGGAGCCAACTTCGCTTCTGCTGGGATTGGAATCCTCAACGACACAGGCATCCAATTTGTGAGCATTATAAGAATATTCCAGCAATTTGAACTGTTCCAACAGTACCAACGGCGGCTAAGTGGGATCGTAGGAGCAGCCCAGGCACAGAGGATAGTGAATGGAGCCCTTGTGCTCATGACACTGGGTGGGAACGACTTCGTTAACAACTATTTCGCCACGCCTCTCTCTGCAAGGTCACGCCAATTCACCGTCCCCCAATTCTCCAGCTACCTTATCTCCGAGTACCGAAAAATTCTCTTGAGGTTGTATGAGCTGGGGGCTCGTAGAGTGCTAGTGACTGGGACAGGACCATTAGGGTGTGTTCCGTCGCAGCTTGCTCAGAGAAGCAGAAACGGAGAGTGCGTGCCAGAGTTGCAAGAGGCAGCACGGATTTTCAACCCACAGCTGGTTCAAATGATCAAAGAACTCAACTCCCAAGTGGGCGCTGACGTTTTTGTTACTGCCAATGCCTTCCAAATGAACATGGACTTCATCAACAACCCTCAGAGATTTGGACCATTATCTCTGTCTACTGCTGACATTTTCCCTGACACAGGAAAAGTCGCTTTTTATTTATCACTCAGTTCCTCTGTCCGTCTTAGCACTTTAACCAGATCTGAATCTGCTCGCTCCAGATCCAACCCCTTCATGAATTCAGCAATGGAGGAAGCACTGGAACTTGCACGCACCAAGGACACCAAGGAGAGGATGGCCGGTGTGGAGCGTCTTCATCAACTATTGGAAGCTTCCAGAAAGAGTCTCACTTCATCCGAGGTTACTTCATTAGTCGATTGTTGCTTGGATCTCTTGAAAGATAACAACTTCAGGGTCTCTCAGGGTGCACTTCAAGCCTTGGCCTCTGCTGCTGTTCTCTCCGGCGAGCATTTCAAACTTCACTTCAATGCGCTTGTTCCCGCCGTCGTCGACCGCTTGGGGGATGCCAAACAGCCGGTTCGCGACGCCGCCAGAAGACTCTTGCTCACTCTCATGGAGATTTCTTCTCCCACAATAATTGTTGAAAGAGCAGGGTCCTTTGCTTGGACACACAAAAGCTGGAGAGTCAGAGAGGAGTTTGCTCGTACAGTGACATCAGCAATTGGTCTATTTGCATCTACTGAGCTTACCCTTCAACGGGCTATTCTTCCACCAATTTTGAAGTTTCTGAATGATCCAAACCCTGGTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAGATGTATGCACAAGCTGGGTCTCAATTTCGTGATGAACTTCAGCGCCACAATCTTCCCTCATCTTTGGTTAAAGATATTAATGCCAGATTAGAGGGCATTCAACCAAAAGTTCGCTCTTCAGATGGTATTCCAAGTGGTTATATTACTGGAGAAATCAAGCCTTTGAACATTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAAGTTCATCAAGGGAGACGTCTCTTTTCGGAGGAGAAGGTGATCTCACAGAGAAACCCATAGATCCTGTCAAGGTATACTCAGAGAAGGAGTTAATCAGGGAATTTGAGAAGATTGCATCTACCCTTGTACCAGAAAAGGATTGGTCAATTCGTATTGCTGCCATGCAGAGAGTTGAAGGTCTTGTTTTTGGAGGTGCTGCTGACTATCCATGTTTTCGGGGACTCTTGAAGCAACTTGTTGGACCTTTAAGCTCACAATTGTCCGATCGAAGATCTAGCATTGTGAAGCAGGCTTGCCATCTGTTGTGCTTTTTGTCAAAGGAACTCTTGGGTGACTTTGAACCATGTGCTGAAATGTTCATACCAGTCCTTTTCAAGCTGGTTGTGATTACTGTACTTGTAATTGCAGAGTCTGCAGATAATTGCATAAAAACGATGCTGCGTAATTGCAAAGTTGCTCGTGTGCTTCCTCGAATAGCTGATAGTGCAAAAAATGATCGCAATGCTATACTTCGTGCAAGGTGTTGTGAATACGCTCTTTTGATACTTGAACATTGGCCTGATGCTCCAGAAATACAGCGATCGGCTGATTTATATGAGGATCTTATAAGGTGTTGTGTTTCAGATGCAATGAGTGAGGTACGGTCTACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCAGAGCGTTCCCGCCGCCTATTTTCGTCGTTTGACCCAGTTATTCAAAGGTTAATAAATGAAGAGGATGGAGGAATACATAGGCGACATGCTTCACCTTCCATTCGTGATAGAGGTGCACTGATGTCATTAACTAGTCAAGCCTCTGCTCCATCAAATCTACCTGGATATGGAACTTCTGCTATTGTTGCAATGGACAGAACTTCAAGTTTATCATCAGGGACATCTGTCTCTTCGGGTGTACTTATTTCACAAGCAAAGTCACTTGGTAAAGGTACAGAGCGTAGTTTAGAAAGTGTGTTGCATGCAAGCAAACAGAAGGTCACTGCTATTGAAAGTATGCTTAGAGGTTTGGATTTGTCTGATAAGCATAATTCATCTGCTCTCCGCTCATCAAGTTTGGATCTAGGAGTTGACCCTCCATCATCTCGTGATCCACCATTCCCTGCTGCTGTCCCAGCATCTAATCACCTGACAAACTCTTTAACTACAGAATCAACTGCTGCTGGTGTCAATAAAGGTAGTAATCGAAATGGTGGTTTGGGTTTGTCTGATATAATTACTCAAATTCAAGCTTCCAAAGATTCTGGTAAGTTATCATATCATAGTAATGTTGCTGTGGAGCCTTTGTCTGCACTTCCATCATACTCAAGTAAAAGGGCTTCTGAAAGACTACAAGAAAGAAGTTCTATTGATGACAATAGTGACATTAGGGAGGCAAGGCGATTTATGAACCCCCACATTGATAGGCAGTATATGGATACTCCTTATAGAGATGGAAACTTTAGGGATTCACAAAATAGTTATGTCCCTAATTTCCAGAGGCCACTATTGAGGAAGAATGTAGCTGGACGTATGTCTGCTGGAAGGAGGAGAAGTTTTGATGATAGCCAGCTATCACTTGGGGAGTCATCTAATTATGCAGATGGACCAGCATCTCTCCATGAAGCTCTGAGTGAAGGACTTAGTTCTGGTTCTGACTGGTCTGCTAGGGTTGCTGCTTTTAATTATCTTCACTCTTTGTTACAGCAAGGTCCAAAGGGAATTCAAGAAGTAGTCCAAAATTTTGAGAAGGTAATGAAGCTGTTTTTTCAGCACTTAGATGATCCCCACCATAAAGTTGCACAGGCTGCTCTTTCAACACTTGCAGATATTATTTCAGCATGCCGAAAGCCCTTTGAGGGTTACATGGAAAGAATATTACCCCACGTGTTTTCTCGGTTAATTGACCCCAAAGAGCTTGTTAGGCAACCTTGCTCAACAACTTTGGAAGTTGTCAGCAAAACTTACAGCGTAGATTCTCTCTTACCAGCATTGCTCCGCTCACTAGATGAACAAAGGTCTCCAAAGGCGAAGTTGGCTGTAATTGAGTTTGCAATCAGCTCCTTTAACAAGCATGCAATGAATCCAGAAGGTGCTGCTAATACTGGCATCCTGAAATTATGGCTTGCTAAGTTAACACCATTGGTTCATGACAAAAGTACAAAGCTTAAAGAAGCAGCGATTACATGCATTATATCAGTGTATTCTCACTTTGATTCTACTGCAGTTCTGAATTTCATTCTTAGTTTGTCAGTTGAGGAGCAAAATATGTTGAGACGAGCCCTTAAACAGTACACTCCTCGCATTGAAGTAGACCTAATGAACTATCTGCAGAGCAAGAAAGAGAGACAACGTTCTAGGTCTTCCTATGATCCAACTGATGTTGTTGGGACATCCTCTGAAGAGGGGTATGTTGGTGTGTCTAGGAAAGCTCATTACCTTGGAAGGTATTCTGCTGGTTCCCTTGATGGTGATGGTGGTAGGAAGTGGAGTTCCCAAGATTCAGCCCTTTTTAAAGCCGGTCTTGGCCAAGCAGCTTCTGGTGAAACTCTGGAACATTTGCATCAGAATTTTGATACAGAATCTAATAGTAGTAATCTTGGTTCAAAAACTAAGGATCTTGCTTACACAGTCAATCCAATGGGCCAAAACATTGGCTCTCAAATTAGTCAACTTGGGCATGCGGACAGTACCATTAACTTTGAGGATGTTTCAACTCCTCGTCTGGATGTTAATGGTCTGATGTCCTTGGAACATTTAAATGTTACTGAAGACTTTGGACATGAAAAAGAACATCCTTCTGAGTTGGACCTTAATCAGCACTTATCCGAAGCTGCAAAGATTAGCTCCTTGACAGACACAGGACCCAGCATTCCTCAGATTCTTCATCTGATATGCAGTGGGGGTGATGGAAGCCCTATTTCAAGCAAGAGGACTGCACTTCAACAGTTAGTTGAAGCTTCTATAGCAAATGATCATTCTATTTGGACTAAGTACTTCAATCAGATTTTGACAGTTGTGCTCGAGGTGTTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCGTTAATAGTTGAAATGCTCAAAAACCAGAAAGATGCCATGGAAGATTCAGTTGAAATTGTAATTGAGAAGCTGCTTCATGTTACAAAGGATATTGTCCCCAAGGTCTCAAATGCAGCTGAGCACTGCCTGACCATTGTTTTATCTCAGTATGATCCATTCAGATGTTTAAGTGTTATTGTCCCTTTACTGGTTACTGAGGATGAGAAAACTCTTGTTACCTGCATAAATTGCTTGACAAAGCTTGTGGGCCGGCTCTCACAGGAGGAATTGATGGCTCAGTTACCTTCATTTTTGCCTGCACTTTTTGAAGCTTTTGGAAACCAAAGTGCAGATGTTCGCAAGACTGTTGTTTTCTGTCTAGTGGATATCTATATCATGCTCGGGAAAGCATTCTTGCCATACTTGCAAGGGCTTAACAGCACACAGTTGAAGTTGGTCACCATTTATGCAAATCGAATCTCGCAGGCCAGGACAGGCGTGTCAATTGATGCCACTCATGATTAG 5625 0.4386 MALLLSPKYSLIPREQEEKGRLKNILNLEKRKMASSIILEIELISVSPSSFASTLPRYDINNIDPSASHFSSCSSPGNKLVSREKATLNKIIMSKWRVLLAILVVAQIGVAPEKAEGARAFFVFGDSLVDSGNNNYLVTTARADSPPYGIDYPTHRPTGRFSNGFNLPDIISQQIGSEPTLPYLNPELNGQKLLVGANFASAGIGILNDTGIQFVSIIRIFQQFELFQQYQRRLSGIVGAAQAQRIVNGALVLMTLGGNDFVNNYFATPLSARSRQFTVPQFSSYLISEYRKILLRLYELGARRVLVTGTGPLGCVPSQLAQRSRNGECVPELQEAARIFNPQLVQMIKELNSQVGADVFVTANAFQMNMDFINNPQRFGPLSLSTADIFPDTGKVAFYLSLSSSVRLSTLTRSESARSRSNPFMNSAMEEALELARTKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDCCLDLLKDNNFRVSQGALQALASAAVLSGEHFKLHFNALVPAVVDRLGDAKQPVRDAARRLLLTLMEISSPTIIVERAGSFAWTHKSWRVREEFARTVTSAIGLFASTELTLQRAILPPILKFLNDPNPGVREAAILCIEEMYAQAGSQFRDELQRHNLPSSLVKDINARLEGIQPKVRSSDGIPSGYITGEIKPLNINPKKSSPKAKSSSRETSLFGGEGDLTEKPIDPVKVYSEKELIREFEKIASTLVPEKDWSIRIAAMQRVEGLVFGGAADYPCFRGLLKQLVGPLSSQLSDRRSSIVKQACHLLCFLSKELLGDFEPCAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADSAKNDRNAILRARCCEYALLILEHWPDAPEIQRSADLYEDLIRCCVSDAMSEVRSTARMCYRMFAKTWPERSRRLFSSFDPVIQRLINEEDGGIHRRHASPSIRDRGALMSLTSQASAPSNLPGYGTSAIVAMDRTSSLSSGTSVSSGVLISQAKSLGKGTERSLESVLHASKQKVTAIESMLRGLDLSDKHNSSALRSSSLDLGVDPPSSRDPPFPAAVPASNHLTNSLTTESTAAGVNKGSNRNGGLGLSDIITQIQASKDSGKLSYHSNVAVEPLSALPSYSSKRASERLQERSSIDDNSDIREARRFMNPHIDRQYMDTPYRDGNFRDSQNSYVPNFQRPLLRKNVAGRMSAGRRRSFDDSQLSLGESSNYADGPASLHEALSEGLSSGSDWSARVAAFNYLHSLLQQGPKGIQEVVQNFEKVMKLFFQHLDDPHHKVAQAALSTLADIISACRKPFEGYMERILPHVFSRLIDPKELVRQPCSTTLEVVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANTGILKLWLAKLTPLVHDKSTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNMLRRALKQYTPRIEVDLMNYLQSKKERQRSRSSYDPTDVVGTSSEEGYVGVSRKAHYLGRYSAGSLDGDGGRKWSSQDSALFKAGLGQAASGETLEHLHQNFDTESNSSNLGSKTKDLAYTVNPMGQNIGSQISQLGHADSTINFEDVSTPRLDVNGLMSLEHLNVTEDFGHEKEHPSELDLNQHLSEAAKISSLTDTGPSIPQILHLICSGGDGSPISSKRTALQQLVEASIANDHSIWTKYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSNAAEHCLTIVLSQYDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQSADVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGVSIDATHD 1874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g2951 1874 SUPERFAMILY ARM repeat 718 1864 IPR016024 -
Glsi02g2951 1874 Gene3D - 1225 1449 IPR011989 -
Glsi02g2951 1874 Coils Coil 1710 1730 - -
Glsi02g2951 1874 Gene3D SGNH hydrolase 111 397 IPR036514 -
Glsi02g2951 1874 ProSiteProfiles HEAT repeat profile. 511 549 IPR021133 -
Glsi02g2951 1874 Gene3D - 695 934 IPR011989 -
Glsi02g2951 1874 SMART TOG_3 410 652 IPR034085 -
Glsi02g2951 1874 SMART TOG_3 698 942 IPR034085 -
Glsi02g2951 1874 SMART TOG_3 1630 1866 IPR034085 -
Glsi02g2951 1874 SMART TOG_3 1209 1454 IPR034085 -
Glsi02g2951 1874 PANTHER CLASP 460 1860 - -
Glsi02g2951 1874 Pfam Vacuolar 14 Fab1-binding region 1660 1747 - -
Glsi02g2951 1874 CDD SGNH_plant_lipase_like 120 380 IPR035669 -
Glsi02g2951 1874 MobiDBLite consensus disorder prediction 1033 1047 - -
Glsi02g2951 1874 Gene3D - 1657 1865 IPR011989 -
Glsi02g2951 1874 Gene3D - 425 649 IPR011989 -
Glsi02g2951 1874 ProSiteProfiles HEAT repeat profile. 588 626 IPR021133 -
Glsi02g2951 1874 MobiDBLite consensus disorder prediction 1033 1064 - -
Glsi02g2951 1874 Pfam CLASP N terminal 486 619 IPR024395 -
Glsi02g2951 1874 Pfam CLASP N terminal 712 928 IPR024395 -
Glsi02g2951 1874 Pfam CLASP N terminal 1231 1425 IPR024395 -
Glsi02g2951 1874 Pfam GDSL-like Lipase/Acylhydrolase 122 360 IPR001087 GO:0016788
Glsi02g2951 1874 SUPERFAMILY ARM repeat 424 830 IPR016024 -
Glsi02g2951 1874 MobiDBLite consensus disorder prediction 667 695 - -
Glsi02g2951 1874 MobiDBLite consensus disorder prediction 674 689 - -
Glsi02g2951 1874 FunFam Protein peg1 694 941 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g2951 Glsi-ChrGlsi02 78280831 78304748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g2951 120 380 Acyl Lipid Metabolism Gene Families AT4G10950 33.969 2.07e-40 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2951 02 78280831 78304748 Glsi11g0812 11 5124387 5141577 CCT
Glsi02g2951 02 78280831 78304748 Glsi02g2951 02 78280831 78304748 ECH