Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0729 ATGTTTAGCAGGCCAAGAGTTGCAAGTGCTTTTGGTATATTCAAAGGAAAATGTCAAGATGAATCATCTCTAACAACGGGTTTGCTTCTGGATGTTCCTCCAGAGATTGAATTGTCTGACTATGGAAGGATCCCGAGTCCAGGCAGTGAGAGCCCTTCAGGACTTCTTAATGGCGAGAGCTTAAATGTAGAGCCAATTGCTGATTTGGACCTCTTCTTTGAAAGGCTTTACGACTACTACTGTGAGAAAGGGCTTTGGTGCATCATCATAAAGTGGATTGTTGAACTTCTGAGTCTGGGTTTCACCATATAAGCTCTTCATCAACACCCTTTAACCCCACTAACACTTACCAAAGCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGTTTCTTGAGGTTCTTTGCTCAACTCAAGGACACTCTTGAAATCCGTCAGTTTTACTACAATAGTCTCCATGTTACTGACGGCGAAATTCAAACCATGCCTTGGGCAACAATTCTTGAAAAGGTTGTTTTGATACAAAGTTCACGAAAGCTTTGTGTGGTTAAGGATCTTTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAAGGGGTGCTTGCTTTCCCCATTTCTCAGTGGCTCCCAGGTGCTGGTCCTGCAGTGAAATCTGATCTTAACGGAACACAATATCATCTAATACTAACAAAGACCCTTGAGTGGACATTGAATTGGTGTATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTTAGAAGGGACTTTGTGTCTAATCCAAAGACCTTGAAGAAAAGGCTTATGGTAGTTGGGCTTGCCATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAGCAATTTTATAATCATCCAAGTACTGCTTCATCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTCGGGAATTCAATGAGGTGGACCATCTCTTCAAGCATCGGATTAATAACAGCATAGTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATTATTGCAAAGTTCATCTCTTTTGTATCGGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTGCTAGAAGGCCATATATTTGGTCGAAACTTATTTTGGTATGCTGCTGTTTTTGGAACTATAACCGCCATTAGTAGGGCTGCAGTTACAAATGAGCTTCTGGTCTTAGATCCTGAGGGAGCAATGTCTATGGTGGTTCAACATACCCATTATATGCCAAAGAGATGGCGAGGCAAAGAAAATACTGAACTGGTCCGCATCAAGTTTGAAACCTTGTTTCAGTATACTGGAATGATGTTACTTGAGGAGATGGCCTCAATTTTTCTCACTCCATATTTACTTTTGTTTGTTGTCCCAAAGCGAGTTGATGATATTTTGCAATTCATTGCAAATTTCACAGTGAATGTTGAAGGTGTTGGCCACGTCTGCAATTTTAGCGTCTTTGATTTTGAAGGGCATGGAAACAGCAATTATGGTTCCCCATATAACGCACCTCGCAGCCAGAGGAGTTCTCAGGGGAAGATGGAGAAATCATTCTTGAGCTTTCAGAGTAGTTACCCGTCATGGGAACCAAATGCTCAGGGTAAGCATTTTTTGCTAAATCTTAGAACCTTCAGAGAGCAAAATTTGCAAGGACATGGAAACATAAATTCATTTTGCCCTCCTAGATTATGGAGGGGTAGTCCCAATAGGAGGAGCAATGGAGACAGAAATAGGTTTATATCCAAAGGAATGCCATGTAATACTTTCGTAAGTGGCAATCACTTGGGTTCATTGTGGCTGATTGATGCCAATCAAAACCATCATCCTTATCTTCTAGATTGGTACTATACATGTCGACCTCGTAATGAACCTTTTGAAGTAAACGAGTGTTATTCCAACTTGACTCAGAAGGAACCTGGTTATGAAGAATACATAAATGAGTATAGTGATGATCGGGGTGCATCTCAGCTTGGTGCTTCCACATCCGCTCCCCTCTTCAGGGAAAGCCTAATCCAGGATCAAAATCATACTGATCGGTCCCACTCTATCAGGAGTCATTGGTGGGATAGACGTGGACCCCCGGATGGACAGGCGCAGACAAGCTTTCTTGAGCCTCCTGATTATAATCAGCCAACATCATCTAATTATTGTTATGATAAGTTTTCTGATAGAGGCTCAGATGATCAAGAACAACAATACTTGGACTGGAGAGATTATCGCAGATCAAGAACAAGGTGCACAGATGCCTTAGAGGCAGGAGAATTTAGACTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACTCCCACCAAAAATCCCAGCACTCCAAGCTTTTGA 2439 0.4121 MFSRPRVASAFGIFKGKCQDESSLTTGLLLDVPPEIELSDYGRIPSPGSESPSGLLNGESLNVEPIADLDLFFERLYDYYCEKGLWCIIIKWIVELLSLGFTIXALHQHPLTPLTLTKAIIVGYLGIFSIYWIFCFLRFFAQLKDTLEIRQFYYNSLHVTDGEIQTMPWATILEKVVLIQSSRKLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWLPGAGPAVKSDLNGTQYHLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLMVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVDHLFKHRINNSIVHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAVTNELLVLDPEGAMSMVVQHTHYMPKRWRGKENTELVRIKFETLFQYTGMMLLEEMASIFLTPYLLLFVVPKRVDDILQFIANFTVNVEGVGHVCNFSVFDFEGHGNSNYGSPYNAPRSQRSSQGKMEKSFLSFQSSYPSWEPNAQGKHFLLNLRTFREQNLQGHGNINSFCPPRLWRGSPNRRSNGDRNRFISKGMPCNTFVSGNHLGSLWLIDANQNHHPYLLDWYYTCRPRNEPFEVNECYSNLTQKEPGYEEYINEYSDDRGASQLGASTSAPLFRESLIQDQNHTDRSHSIRSHWWDRRGPPDGQAQTSFLEPPDYNQPTSSNYCYDKFSDRGSDDQEQQYLDWRDYRRSRTRCTDALEAGEFRLHFDDIYSRPPETPTKNPSTPSF 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0729 812 PANTHER APG9 AUTOPHAGY 9 105 755 IPR007241 GO:0006914
Glsi11g0729 812 MobiDBLite consensus disorder prediction 735 753 - -
Glsi11g0729 812 Pfam Autophagy protein ATG9 63 104 IPR007241 GO:0006914
Glsi11g0729 812 Pfam Autophagy protein ATG9 118 521 IPR007241 GO:0006914
Glsi11g0729 812 MobiDBLite consensus disorder prediction 715 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0729 Glsi-ChrGlsi11 4612291 4618184 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3063 02 79242948 79249353 Glsi11g0729 11 4612291 4618184 CCT
Glsi11g0729 11 4612291 4618184 Glsi11g0729 11 4612291 4618184 ECH