Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3063 ATGTTTAGCAGGTCAAGGGGTCCAAGTGCTTTTAATATTTTCAAATGGAAACATCAAAGTGAATCATCTCTGACAACGGGGTTTCTTCAGGATGTTCCTCCAGAGGTTGAATTGTCCGACTACAGAAGGATCCCAAGTCCAGTTAGTGAGAGCCCTTCGGGTCTTCTTAATGGTGAGAGCTTAAATGTAGAGCCAATTTCCGATTTGGACCTCTTCTTTGAAAGGCTTTACAGCTACTACTGCGAGAAAGGGCTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTCTTAGTCTTGGATTTACCATATGTTTCTCAGGATTTTTCTTATTATATGTTGATTGGAACGGACTTCGTAATGCAAAATGTGGGATGGATGCAGTTGAATCTGGAATTAAGCCCTGTGATCTTGGTAAAGAAGCTCTTCATCAACACCCTTTAACCCCACTAACAGTTACAAAAGCTATTATTGTTGGATACTTAGCAATATTTTCCATCTATTGGATATTTTGTTTCTGGAGGTTCTTTGCTCAACTAAAGGACACTCTGGAAATCCGTCAATTTTACTACAATAGTCTCCATGTTACTGATAATGAAATTCAAACTATGCCCTGGGCGAAAATTCTTGAAAAGGTTGTTCTGGTGCAAAGGTCCCGTCAGCTTTGTGTGGTAAAGGATCTCTCTGCTCATGACATGGTGATGAGATTGATGCGGAAGGAAAACTACTTGATTGGAATGCTCAACAAGGGGGTTCTTGCTTTCCCCATTTCTCAGTGGGTCCCAGGTGCTGGTCCTACAGTGAAATGTGGCCCTAATGGAACCCAATATCGTCTAATACTAACCAAGACCCTTGAGTGGACATTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTGAGAAGGGATTTTGTTTCTAATCCTAAGACATTAAAGAAAAGGCTCATCGTAGTTGGGCTTGCAATGCTTTTGCTTTCTCCATTTCTTGTTATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAACAATTTTATAATCATCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAATTCAATGAGGTGGAACATCTCTTCAAGCATCGGATTAATAGCAGTGCAGTACATGCTTCTGATTATCTCAAGCAATTTCCATCACCTATTATATCTATCATTGCAAAGTTCATCTCCTTTGTATCGGGTGGATTTGCTGCAATTCTGATCATCATTGCTTTTCTTGAGGAATCTCTGCTAGAGGGCCATATATTTGGTCGAAACTTGTTTTGGTATGCTGCTGTTTTTGGAACTATAACTGCCATTAGCCGGGCTGCAGTTACAAATGAGCTTCTGGTATTAGATCCAGAGGGAGCAATGTCTATGGTGGTTCAACATACACATTATATGCCAAAGAGATGGCGTGGCAGAGAAAGTATTGAAATGATCCGCATTGAGCTTGAAACCCTATTTCAGTATACAGGGATGATGTTATTTGAGGAGATGGCCTCAATTTTCCTTACTCCATATTTACTTTTGTTTGTTGTCCCAAAGCGGGTTGATGATATTTTGCAGTTCATAGCAGATTTCACTGTGAATGTTGAAGGTGTTGGCCATGTTTGCAGTTTTAGTGTCCTTGATTTTCAAGGCCATGGAAATGGCAATTATGGTTCCCCATGCAATGCACCTCGCAGCCGGAGGAGTTCCCAGGGAAAGATGGAGAAGTCATTCCTGAGCTTTCAGAGTACTTACCTGTCATGGGAACCAAATGCAGAGGGGAAGCAGTTTTTGCTAAATCTTAGAACCTTTAGAGAACATAATTTACCAGGACATGGAAACAGATATGCATTTTTCCCTCCTAGAATGGGGAGGGGTAGTCCCAATATGAGCCCCAATATGATGGGCAATGGAGAGAGAAACAGGTTTATATCCAGGGAAAAGCCATATAGTACTATTGAAATTGGCAATCGCTTAGATCCATTGTGGCTAATTGATTCCAATCAAAACAGTCATCCCTATCTTCTTGATTGGTACTATACTTCTGGACCTCATGATACCAGTTCAAGAGATGTTCCAACAGAACCTTTTGAAAGGACTAACCGTCATTCCAGAGAGTATTGGATGTCCTCCAATGTGACAGAGAATGAACCTGGGTATGAAGAATACCTAAGAGAGTATGGTGAGGATCGAGCTACATCTCATATTGAAGCGTCCACATCAACTCCAATCTTAAGGGAAACTCTACTTCAAGATCCAAATTGTAATGATTTGCTCCACTCTAGCAGGATTCCTTGGTGGGCTAGAAGTCGCCCGCACGGTGGACAAGCTCAGGCAAGCTTTTTTGAGCCTCCAGATTTCAATCACCAAACATATAATTATTATGATAAGTTCTCTGATAGAGGCTCAGACCATCAAGAACAACACTTGGACTGGAGAGATCATCACAGATTATCTAGAACAACACACATTGATGACTTAGAGTCAGAAGACTGTAATCTTCATTTTGATGATATTTATAGCAGACCTCCAGAAACTCCCATGGTAAATCCAAGTACTGCAAGCGTTTGA 2598 0.4095 MFSRSRGPSAFNIFKWKHQSESSLTTGFLQDVPPEVELSDYRRIPSPVSESPSGLLNGESLNVEPISDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSGFFLLYVDWNGLRNAKCGMDAVESGIKPCDLGKEALHQHPLTPLTVTKAIIVGYLAIFSIYWIFCFWRFFAQLKDTLEIRQFYYNSLHVTDNEIQTMPWAKILEKVVLVQRSRQLCVVKDLSAHDMVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKCGPNGTQYRLILTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPKTLKKRLIVVGLAMLLLSPFLVIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWIFREFNEVEHLFKHRINSSAVHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLFWYAAVFGTITAISRAAVTNELLVLDPEGAMSMVVQHTHYMPKRWRGRESIEMIRIELETLFQYTGMMLFEEMASIFLTPYLLLFVVPKRVDDILQFIADFTVNVEGVGHVCSFSVLDFQGHGNGNYGSPCNAPRSRRSSQGKMEKSFLSFQSTYLSWEPNAEGKQFLLNLRTFREHNLPGHGNRYAFFPPRMGRGSPNMSPNMMGNGERNRFISREKPYSTIEIGNRLDPLWLIDSNQNSHPYLLDWYYTSGPHDTSSRDVPTEPFERTNRHSREYWMSSNVTENEPGYEEYLREYGEDRATSHIEASTSTPILRETLLQDPNCNDLLHSSRIPWWARSRPHGGQAQASFFEPPDFNHQTYNYYDKFSDRGSDHQEQHLDWRDHHRLSRTTHIDDLESEDCNLHFDDIYSRPPETPMVNPSTASV 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3063 865 PANTHER APG9 AUTOPHAGY 9 2 811 IPR007241 GO:0006914
Glsi02g3063 865 Pfam Autophagy protein ATG9 63 557 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3063 Glsi-ChrGlsi02 79242948 79249353 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3063 02 79242948 79249353 Glsi11g0729 11 4612291 4618184 CCT
Glsi02g3063 02 79242948 79249353 Glsi02g3063 02 79242948 79249353 ECH