Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0649 ATGAAGTACTTTGTTTGTAAACATTATCAGAATGTCTATGTAAACTGGTTTGCACACTATTCTGACGTTTCAAAGCTGTCAGCCAATATCTCAAATGATCCAGTATCTCCTTTTGTTTCTACGAGCAAAGGGAGGTTTCTATCATATACTGCAGCATCATATGCTTTAGGAAGCACTTCTGGTTCCAAGTCTCTTATCCATGTGATTGCATGTGAAGAAGAGTCCTTCAGAATGATAGTGGTCCTGCAAGGAAAGTATAGATTTTTATTCCTCAACTTATGCTTGTGGCCCAGACAGACATTCAAAGCACGAAGAATGGAAAATGTTGAGCAAGTTGAAGATGATGCTCATTCTGAGAGCATCTTGGGCAACTCTGCTAGAGAGAACAAGGATTCTCTTCTTGTGCATGATAAGGGCAATGCAATGGAGACTTTGCACCTGTCTAAGCTATATGAAGTTCTTCCAACAATGGGAGATGACAACTCGAAGAAAAGCAAGCTTTCATGGCCCAAAACATTGGTCAAGAAGTGGTTCAATATCAAGAGCAAAGCCGAGGACTTTCAGGCAGACGATGTCCTTTATGAAGGTGTTGATGAAGAGTGGAGGAGCAACTACTCACAGAGAGAGGCATGCACTATCAAGAAAAGCAAAACAGAGAGATCAAGCAGGAGGCACTTGGACAGAATGCGGCGAGGTTTGATTGACCTTGACACTGCTCAAATTACAGATGTGAATAATTATAGGATTTTCGTTGCTACTTGGAACGTAGCTGGGAAATCTCCTCCAAGTTATTTGAACCTTGAAGATTGGCTTCACACCTCTCCGCCTGCTGATATCTATGTTCTGGGGTTTCAAGAAATTGTACCTCTTAATGCTGGTAACGTTTTGGGCACAGAAGACAATGGCCCTGCTAGAAAGTGGCTAGCTCTTATTAGGAAGACCTTAAACAGTCTCCCTGGAACAAGTGGTGGATGCCGCACTCCTTCACCAGTCCCTGATCCTATTGTAGAGCTAGATGCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCCCTTTCTTCCATAGGAGGTCCTTCCAGTCCTTGAGTCGTAGTATGAGAATGGACAATGACATGTCACTGCCACAAGCACGACTGGATCGCCGCCTCAGTGTCTGTGATAGAATGATCCTTGGTCAAAGGACAAGTGACTATGACCCTAATTATAGATGGAATTCCTCAGATGAAGAAACTGGACCTGGTGATTCCCCCGTTACAACACAATATTCACCCATGTCATGTAGCTGTTCTTTCTCCATGGAGGACAGAGATAGGCAGACAGAGCACTCAAGATACTGTTTGGTTGCCAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGCGATATCAGAGATGATGTTCACAACATGAAAGTCTCTTGTGTTGGCAGAGGATTGATGGGTTATCTTGGAAATAAGGGTTCAATTTCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCGTCTGTAGTCATTTGAGTTCTGGACAAAAGGAGGGTGATGAACTGAGAAGAAATTCAGATGTATTGGAGATTCTCAGAAAGACAAGGTTTCCCCAGGTTCCTGGCATTGGTGATGAGAATTCTCCTCAGACAATTCTGGAACATGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCCCTTTCTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCGGAATTGGAAGGCTTTGTTAGAGAAAGACCAGCTGCGTATAGAGCAAAGGCAAGGTCGTGTCTTTGAAGGATGGAATGAAGGGAAGATATATTTCCCTCCCACTTACAAGTATTCAAATAATTCAGACAGATATGCAGGCGATGAAAGGCACTCAAAACAAAAGCGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGTATGGAAGAGGCCTCCGCCAATTATCCTATGTTCGTGGGGAGTCAAGGTTCTCTGATCATAGACCAGTTTATAGCATATTCCTGGCAGAGGTTGATTCTATTAACCGTAGCCGAACCAAAAGAAGCTCCAGTTCCAGAATTGCAATAGAAGAGTTGCTGCCACATCCACATGGTTACAGTTACACTGAATTGAATCTCTTCTGA 2142 0.4304 MKYFVCKHYQNVYVNWFAHYSDVSKLSANISNDPVSPFVSTSKGRFLSYTAASYALGSTSGSKSLIHVIACEEESFRMIVVLQGKYRFLFLNLCLWPRQTFKARRMENVEQVEDDAHSESILGNSARENKDSLLVHDKGNAMETLHLSKLYEVLPTMGDDNSKKSKLSWPKTLVKKWFNIKSKAEDFQADDVLYEGVDEEWRSNYSQREACTIKKSKTERSSRRHLDRMRRGLIDLDTAQITDVNNYRIFVATWNVAGKSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGGCRTPSPVPDPIVELDADFEGSMRQKATPFFHRRSFQSLSRSMRMDNDMSLPQARLDRRLSVCDRMILGQRTSDYDPNYRWNSSDEETGPGDSPVTTQYSPMSCSCSFSMEDRDRQTEHSRYCLVASKQMVGIFLTVWVKSDIRDDVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFVCSHLSSGQKEGDELRRNSDVLEILRKTRFPQVPGIGDENSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMRNWKALLEKDQLRIEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSKQKRRTPAWCDRILWYGRGLRQLSYVRGESRFSDHRPVYSIFLAEVDSINRSRTKRSSSSRIAIEELLPHPHGYSYTELNLF 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0649 713 SMART i5p_5 381 681 IPR000300 GO:0016791|GO:0046856
Glsi11g0649 713 Pfam Endonuclease/Exonuclease/phosphatase family 252 666 IPR005135 GO:0003824
Glsi11g0649 713 SUPERFAMILY DNase I-like 229 686 IPR036691 -
Glsi11g0649 713 FunFam Type IV inositol polyphosphate 5-phosphatase 7 415 698 - -
Glsi11g0649 713 Gene3D Endonuclease/exonuclease/phosphatase 226 336 IPR036691 -
Glsi11g0649 713 Gene3D Endonuclease/exonuclease/phosphatase 396 698 IPR036691 -
Glsi11g0649 713 MobiDBLite consensus disorder prediction 400 419 - -
Glsi11g0649 713 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 227 339 - -
Glsi11g0649 713 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 174 690 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0649 Glsi-ChrGlsi11 4071778 4080639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0649 280 693 Acyl Lipid Metabolism Gene Families AT2G43900 25.435 1.70e-31 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3148 02 79961597 79964541 Glsi11g0649 11 4071778 4080639 CCT
Glsi11g0649 11 4071778 4080639 Glsi11g0649 11 4071778 4080639 ECH