Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3148 ATGAGAGATGAGAACTTGAAGAAAAGCAAGCTTTCATGGCCCAAATCATTGGTCAAGAAGTGGTTCAATCTCAAGAGCAAAGCCGAAGACTTCCAGGCAGACGATGTCCTTTACGGAGGCGTTGATGAAGAGGGGAGAAGCAACTATCCAGAGAGGGAGGCATGCACTATCAAGAAAAGCAAAACAGAGAGATCAAGCAGGAGGCACTCGGACAAATTGCGGCGGGGTAAGATTGACCTTGATGCCGCTCAGGTTACGGACGTGCATAATTATAGGATCTTCGTTGCTACATGGAACGTAGCTGGAAAATCTCCTCCAAGCTATTTGAGTCTTGAAGATTGGCTTCACACCTGTCCGCCAGCTGATATCTATGTTCTTGGGTTTCAAGAAATTGTACCTCTTAATGCCGGTAATGTTCTGGGCACGGAAGATAATGGTCCTGCGAGAAAATGGCTAGCTCTTATTAGGAAGACCCTAAACAGTCTTCCGGGAACAAGCGGTGGATGCCACACTCCTTCTCCAGTCCCTGATCCAATTGTAGAGTTAGATGCTGATTTTGAGGGGTCAATGAGGCAGAAGGCAACCTCTTTCTTCCACCGGAGGTCCTTCCAATCCTTGAGTCGTAGTATGCGAATGGACAATGACATGTCAATGCCACAACCACAACTTGATCGCCGTCTCAGTGTCTGTGATAGAGTGATATTTGGTCATAGGACTAGTGATTATGACCCCAGTTACAGATGGGGTTCCTCAGATGATGAAAACGGACCTGTTGATTCCCCAGTTATGACACAATATTCACCAATGTCATACAGTGGTTCTCTGTCCGTGGAGGATAGAGATAGACAGACAGGGCACTCAAGATACTGTTTGGTCGCCAGTAAGCAAATGGTGGGGATATTTCTGACAGTTTGGGTGAAAAGCGATATCAGAGATGAAGTTCACAACATGAAAGTGTCTTGCGTTGGCAGGGGATTGATGGGTTATCTTGGAAACAAGGGTTCAATTTCAATTAGCATGTCTTTGCACCAAACAAGCTTTTGCTTCATCTGTAGTCATTTGACTTCCGGACAAAAAGATGGTGATGAGCTAAGGAGAAATTCAGATGTCATGGAGATTCTTAGAAAGACAAGGTTTCCCCGTGTTCATGGCATAGGCGATGACAGTTCTCCTCAGACAATTCTGGAACACGATCGAATAATTTGGCTGGGGGATTTAAATTATCGGATAGCACTCTCTTACCGTGCAGCAAAAGCACTTGTTGAGATGCGTAATTGGAAGGCATTGTTAGAGAATGACCAGCTGCGTGTAGAGCAGAGACAAGGTCGCGTCTTTGAAGGATGGAATGAAGGGAAGATATATTTTCCTCCCACATACAAGTACTCAAATAATTCAGACAGATATGCAGGTGATGAGAGACACTCATCAAAACAAAAGCGAAGAACTCCAGCATGGTGTGATCGTATCTTGTGGCACGGAAGAGGCCTCCGCCAGTTATCTTATGTTCGTGGGGAGTCGAGATTCTCTGATCACAGACCAGTTTATAGTATATTCCTAGCAGAAGTGGAGTCTATTAACCGAAGCCGAATAAAAAAAAGCTCCAGTTGCTCTAGTTCCAGGATTGAAGTAGAAGAGTTGTTGCCACATACCCATACACATTGTTACAGTTACACTGACTTCAATTTTTACTGA 1692 0.4468 MRDENLKKSKLSWPKSLVKKWFNLKSKAEDFQADDVLYGGVDEEGRSNYPEREACTIKKSKTERSSRRHSDKLRRGKIDLDAAQVTDVHNYRIFVATWNVAGKSPPSYLSLEDWLHTCPPADIYVLGFQEIVPLNAGNVLGTEDNGPARKWLALIRKTLNSLPGTSGGCHTPSPVPDPIVELDADFEGSMRQKATSFFHRRSFQSLSRSMRMDNDMSMPQPQLDRRLSVCDRVIFGHRTSDYDPSYRWGSSDDENGPVDSPVMTQYSPMSYSGSLSVEDRDRQTGHSRYCLVASKQMVGIFLTVWVKSDIRDEVHNMKVSCVGRGLMGYLGNKGSISISMSLHQTSFCFICSHLTSGQKDGDELRRNSDVMEILRKTRFPRVHGIGDDSSPQTILEHDRIIWLGDLNYRIALSYRAAKALVEMRNWKALLENDQLRVEQRQGRVFEGWNEGKIYFPPTYKYSNNSDRYAGDERHSSKQKRRTPAWCDRILWHGRGLRQLSYVRGESRFSDHRPVYSIFLAEVESINRSRIKKSSSCSSSRIEVEELLPHTHTHCYSYTDFNFY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3148 563 Gene3D Endonuclease/exonuclease/phosphatase 67 546 IPR036691 -
Glsi02g3148 563 Pfam Endonuclease/Exonuclease/phosphatase family 96 511 IPR005135 GO:0003824
Glsi02g3148 563 FunFam Type IV inositol polyphosphate 5-phosphatase 7 259 546 - -
Glsi02g3148 563 SUPERFAMILY DNase I-like 77 534 IPR036691 -
Glsi02g3148 563 FunFam type I inositol polyphosphate 5-phosphatase 4 isoform X1 71 183 - -
Glsi02g3148 563 SMART i5p_5 225 526 IPR000300 GO:0016791|GO:0046856
Glsi02g3148 563 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 18 538 IPR045849 GO:0004445
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3148 Glsi-ChrGlsi02 79961597 79964541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3148 292 528 Acyl Lipid Metabolism Gene Families AT2G43900 29.137 1.29e-31 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3148 02 79961597 79964541 Glsi11g0649 11 4071778 4080639 CCT
Glsi02g3148 02 79961597 79964541 Glsi02g3148 02 79961597 79964541 ECH