Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0631 ATGGAGCTCAGTAAAGTAACGCTAGAGATCTTCTCCAAACTGGAGCAAAAATGGCTCTCTCACAGTGAAACCACCAACAAAACCCGCATACTCAGCATTGACGGCGGAGGAACTACCGCCATTGTCGCTGGGGCTGCCCTCATTCGCCTTGAGGACCAGATCCGTCTCCAGACCTGCGATCCCCACGCCCAAATAGCCGATTTCTTTGACCTCATCGCCGGTACTGGCACCGGTGCCTTCCTTGCAGCCATGATCACGGCCGATGACGGCACTGGCAGGCCTCTCTATACCGCTAGAGACGCCGTACGTGTCATCGCCCGCAGGAATTCCGAACTCTACAAGCTCAAACTCCCCGGACTTTTCCGCCGGCGTCGAAGATTCTCTTCTAGGAGCATGGATAACGTCTTAAAGGAACTGTTTCAGAGAAGAGAGGATGGACGGGTGTTGACCTTGAAGGACACGTGTAAGCCCCTGCTTATCCCTTGCTTTGACCTCAAGAGTTCGGCGCCATTCGTCTTTTCACGAGCGGACGCATCCGAGTCGCGCAGTTTCAACTTCGACCTCTGGAAAGTATGCCGCGCTACCTCAGCCACACCGAGCCTCTTCAAGCCTTTTCACTTTACCTCAGTGGACGGTAAGACCTCCTGTTCTGCCGTGGACGGCGGACTGGTGATGAACAATCCTACGGCGGCTGCTGTCACTCACGTGCTACTCAACAAGCGTGAATTCCCGTCGGTGAAGGGCGTGGGGGATCTGTTGGTGCTCTCTATAGGCAACGGCCCATCAAGCGGGGCCTCGGGACGGAAGGTATGTGATAACGGGGAGTGCTCGACGTCATCTGTGGTTGACATTGTGCTGGATGGTGTTTCTGAAACCATTGACCAAATGATGGGGAACGCCTTCTGTTGGAACCGTACGGATTATATCAGACTGCAGGCGTTCGGCTTGGGAAGTGGGGAGGAGGTGCTGAAAGAGAGGGGAGTGGAGTCGTTACCATTTGGCGGCAAGCGGTTACTGAAAGAGACTAACGGAAACAGAATCGACACCTTCGTTCAACGTCTTATTGCTTCAGGAAAACCCCCCCTGCATCCTACTCCTAACAAGGCTTCCGCCGTTACCCCTCTCGCTAACGCCAGCTAG 1140 0.5465 MELSKVTLEIFSKLEQKWLSHSETTNKTRILSIDGGGTTAIVAGAALIRLEDQIRLQTCDPHAQIADFFDLIAGTGTGAFLAAMITADDGTGRPLYTARDAVRVIARRNSELYKLKLPGLFRRRRRFSSRSMDNVLKELFQRREDGRVLTLKDTCKPLLIPCFDLKSSAPFVFSRADASESRSFNFDLWKVCRATSATPSLFKPFHFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLLNKREFPSVKGVGDLLVLSIGNGPSSGASGRKVCDNGECSTSSVVDIVLDGVSETIDQMMGNAFCWNRTDYIRLQAFGLGSGEEVLKERGVESLPFGGKRLLKETNGNRIDTFVQRLIASGKPPLHPTPNKASAVTPLANAS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0631 379 Gene3D Cytosolic phospholipase A2 catalytic domain 16 360 - -
Glsi11g0631 379 Pfam Patatin-like phospholipase 31 232 IPR002641 GO:0006629
Glsi11g0631 379 CDD Pat17_PNPLA8_PNPLA9_like 30 313 - -
Glsi11g0631 379 PANTHER PATATIN-LIKE PROTEIN 6 1 358 - -
Glsi11g0631 379 MobiDBLite consensus disorder prediction 358 379 - -
Glsi11g0631 379 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 31 233 IPR002641 GO:0006629
Glsi11g0631 379 SUPERFAMILY FabD/lysophospholipase-like 26 318 IPR016035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0631 Glsi-ChrGlsi11 3969116 3970400 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0631 1 378 Acyl Lipid Metabolism Gene Families AT3G63200 71.466 0.0 566
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3188 02 80276500 80280154 Glsi11g0631 11 3969116 3970400 CCT
Glsi11g0631 11 3969116 3970400 Glsi11g0631 11 3969116 3970400 ECH