Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3188 ATGGCTGTATCCCAGACTATCAATCTCCTTTTGCTTTTGACAATTGCTACTTTTGGTTTGGGTTATGGTGCAGTTTATAAGGTGGTGTTCCAATACGACCCTAAAGAAGACAATGTAATGCAAGTGAGTCGCAGAGATTTCCATTCTTGCGACATTGAGGAACCAATGTTGTTGTATATCTCCGGCAATGACTCCATCACGATGAAAGGCGGCGGCCACCACTACTACGTCAGTGGTACCCATTGCAGGGCTGGGCAGAAGGTTGACGTTAGGGTGCTACCACTCTCACATAACACAACCAACTCTGCACCCACTCCAAGTCCTAGTGTTTCTGCAGGACCTGCTCCAAGCCTTTGCACTGCCGCCTCACTTTTCTGTCATCACTCCCCTCCAACTTCTGCTGCTTCTTCCAATTATGCTCTGTTGCTTATGTACTCAATTATGCTTTTGCTTCACTAAACTATAATTAAGCATAACCTACCTAGCGTGTGTGAAGGGTCGGAGGAAATGGAGCTTAGCAAGATCACGCTGGAGATCTTCTCCAAATTGGAGCAGAAATGGCTTTCTCACTGTGAAACCATCAAGAAAACTCGCATACTTAGCATCGATGGTGGAGGAACCACCGGCATTGTTGCCGGCGCGGCACTCATCCACCTCGAGAACCAGATCCGACTCCAGACCAACAATCCCCATGCCCAAATAGCTGATTTCTTTGACATCATTGCCGGTACCGGCATTGCTGCCCTCCTTGCAGCCATGATCACCGCCGACGACGGCTATGGCAGGCCGCTCTACACTGCCAGGGACGCCGTTCATGTCATCGCCCAAAGGAATTCGGAGCTCTACAAGCTTAAACAAGCCGGGGTTTTTCGCCGGCGCCGGCGATTCTCTTCCAGGAGCATGGATAACGTGTTGAAGCAAGTGTTCCAGAGAAGAGAGGATGGAAAGTTGTTGACCTTGAAGGACACGTGTAAACCCCTGCTTATCCCTTGCTTTGACCTCAAGACTTCGGCGCCATTCGTCTTTTCCCGTGCTGACGCGTCCGACTCGCCGAGTTTCAACTTTGAGCTCTGGAAGGTATGCCGTGCTACCTCAGCCACACCGAACCTCTTCAAGCCCTTCAACTTTACTTCCGTGGATGGCAAGACCTCCTGTTCCGCCGTGGACGGCGGCCTGGTGATGAACAATCCTACGGCAGCGGCTGTGACGCATGTGCTACACAACAAGCGCGACTTCCCATCAGTAAAGGGTGTAGAGGATCTCCTGGTACTCTCCTTAGGCAACGGTGTTTCGAACGGGATACCTGGACGAAAGACATCTGATAATGGGGAGTGCTCGACGTCGTCGGTGGTTGACATTGTGGTAGATGGCGTTTCCGAGACAATTGACCAAATGTTTGGGAACGCCTTCTGTTGGAATCGTACGGACTACGTCAGAATCCAGGCGTTGGGTTTGGGGAGCGAAGGAAGAAAGAGCAGGGGGAGAGAGCTGGAAGAGGAGGAGGTGCTGAAAGAAAGGGGACTAGAATCGTTAGCGTTTGGGGGAAAGAGGTTACTAAAGGAAAGTAACGGAGAAAGAATCGATAGCTTTGTGCAGCGTCTTGTCGCTTCGGGAAAGGCCAGCCTGCCTCCTAGTCCCCGCAAGGATTCCCCCGTTGCCCCTCTCGCTAAGGGCCGCTAG 1680 0.5161 MAVSQTINLLLLLTIATFGLGYGAVYKVVFQYDPKEDNVMQVSRRDFHSCDIEEPMLLYISGNDSITMKGGGHHYYVSGTHCRAGQKVDVRVLPLSHNTTNSAPTPSPSVSAGPAPSLCTAASLFCHHSPPTSAASSNYALLLMYSIMLLLHXTIIKHNLPSVCEGSEEMELSKITLEIFSKLEQKWLSHCETIKKTRILSIDGGGTTGIVAGAALIHLENQIRLQTNNPHAQIADFFDIIAGTGIAALLAAMITADDGYGRPLYTARDAVHVIAQRNSELYKLKQAGVFRRRRRFSSRSMDNVLKQVFQRREDGKLLTLKDTCKPLLIPCFDLKTSAPFVFSRADASDSPSFNFELWKVCRATSATPNLFKPFNFTSVDGKTSCSAVDGGLVMNNPTAAAVTHVLHNKRDFPSVKGVEDLLVLSLGNGVSNGIPGRKTSDNGECSTSSVVDIVVDGVSETIDQMFGNAFCWNRTDYVRIQALGLGSEGRKSRGRELEEEEVLKERGLESLAFGGKRLLKESNGERIDSFVQRLVASGKASLPPSPRKDSPVAPLAKGR 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3188 559 Pfam Plastocyanin-like domain 28 86 IPR003245 GO:0009055
Glsi02g3188 559 MobiDBLite consensus disorder prediction 538 559 - -
Glsi02g3188 559 PANTHER PATATIN-LIKE PROTEIN 6 169 548 - -
Glsi02g3188 559 SUPERFAMILY FabD/lysophospholipase-like 196 487 IPR016035 -
Glsi02g3188 559 Gene3D Cytosolic phospholipase A2 catalytic domain 189 542 - -
Glsi02g3188 559 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 200 402 IPR002641 GO:0006629
Glsi02g3188 559 Gene3D - 17 92 IPR008972 -
Glsi02g3188 559 SUPERFAMILY Cupredoxins 28 93 IPR008972 -
Glsi02g3188 559 CDD Pat17_PNPLA8_PNPLA9_like 199 482 - -
Glsi02g3188 559 ProSiteProfiles Phytocyanin domain profile. 1 94 IPR003245 GO:0009055
Glsi02g3188 559 Pfam Patatin-like phospholipase 200 401 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3188 Glsi-ChrGlsi02 80276500 80280154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3188 169 559 Acyl Lipid Metabolism Gene Families AT3G63200 73.282 0.0 597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3188 02 80276500 80280154 Glsi11g0631 11 3969116 3970400 CCT
Glsi02g3188 02 80276500 80280154 Glsi02g3188 02 80276500 80280154 ECH