Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0607 ATGGCGCCTAGTCGCAAAAAGGGCGCCAGCAAAGCAGCGGCGGCTGCGGCCGCTCGTCGGCAATGGAAGGTCGGCGATCTTGTGCTCGCCAAACTTAAAGGGTTCCCTGCTTGGCCTGCTACGGTAAGTGAGCCGGAGAAGTGGGGTTACTCTACTGATTGGAAGAAAGTACTTGTTTACTTTTTTGGAACCCAACAGATAGCTTTCTGCAATCCTGCTGATGTTGAAGCATTTACTGAAGAGAAGAAACAATCTCTTGTTAAACGTCAGGGAAAGGGTGCTGATTTTGTTCGTGCAGTACAGGAGATTATTGATAGTTATGAAAAATTAAAGAGTCAGTCCCAAGTTGAGGAAAACAACTCTGGTGGTAAAGTTACTGGTGCAGATGTTTCAAACACAGTTGATTCATCTGCCAACTTAAGTTTAAAAAATGAGACAGAAGCTCCTGGTTTGACACTTAATTCACAGATGAAGTCTTTGATATCTGTGATGGACAGACGTGAGCCAATATGTGCAGCTGAGGAGGCCTCAGATGCTGTACTGGGTGATGAATCTCTTAATAACGAGGCATCGTTGGAGGAGCCTACTGATAATCCTGCTGCTATTGTAAAATCGCCTTTGTCGATTTCTGGCTCTTCTCAAAAAAGATCTGCAGACTTGTGCCCACAGGGACAGAGAAATGTATCAGTTCGAAGGTCTAGAAGCTCATCACGGGTCCAAAACTTTGTGATGCCTTGTAGTGATGGTGGAAAGAGTGCAGGCAACATATTGGCTAATGCAGTTCAGAGTGTGCCTTTAAGAAGGAATAGATGTATCAAGAAATCACCCAATCTTTTTGGCTGTGATGATGTTGAGTCATCTGCTTTTGCTTCAAAAGGTAGCCTGGAAGACAATGGTTCTGACATTTTCACAATTGATTCTGATGCCTGTAGCCTGAATGAGGGCAGTACCATAGATTCTAATTTTAATCTTGAACATGCTGAGACTATCAAGTCCTTGGAAGGGGATGTTGAGTTGAACAATAGACTTGATCTTGAAATAAAGGCTGTGGTCAATAAGAAGAAGAGAAAACCAAACAGGAAGCGGGCAACTAATGATGCTGCCAAGCCAATCATTACACCAGATGAGGAGGCTGTGGTACCGAATACCAGTCAAAGCTCACAGAATATGTGTGGGCATTTAAAAGAGAGATGCTCTGAGCAAGATGGAGATGAACACTTGCCCCTGTTGAAACGAGCCAGAGTCAGAATGAGCAAATCATCATCCACTGAGACAGAGCTTAATAGCATCTCACAAGCTCGAGAAAAAAGATCGAAGGAAGATTATGTCAACTCACTGCAGCAGAAAATTACATCCTCAAAAAGTGAGAATGTTAGTCCTGCTGATGAAGATTCGTCTTTGTTTAATGGAGATTTGGATAATGTTTCTCCTTCAAAAAATTTAGCTTCATGTTCTGAGAATGGGTTGCAGATTTGTCAAATTAAGCAAGATCAGACACTTGGCCCCTCTGTCGATGGTGAAGCTGCTTTGCCTCCCACTAAACGCCTCCATCGTGCTTTAGAAGCCATGTCAGCTAATGTTGCCGAAGAAGGTGAGGCTCAAACAGAAGCTTCATGTGCAATAATGACATCAAGTGGTAGGTGCTGTATATCTTCTATAACAAGATGTCCTTGTATGCCTATTAGTAGTCAAGGTCAAGAAGAGAATGGTTTAGAATTGGTAGGGGTGGACAGTTGTGGGATTGATTCTTCTCATATCAATGTGAATGGTTTCTCAGCCAGTTCAAATCCAATGATTTTTAAAGAGAATGAATCATCAATAGAAGTGGAAAAGCAATTGATTAAGTTCAATAACCTTGAAATTTGCAAGGATGGCCACCCAGATGCTAGTGACCAAGTTCTCGATCTTATCGATTCTGTGGTTCGTCAGACTTCTGGAACTGATTCTAAAATTCAGTTACGTTCAATTTTGTCTCCTAATCTTGACACAAAATGTTATGAAGTTGGAAACAATCAGGATTCACCAGGTTTGTTATTGCCACCAAATGAACATGAAGACAATATCAGAACTGTTGATCATTCTAATAAAGCATCTGATACATCAGAACATACTAGGATCAGTGTTGATCTTGTCTCAGTTGCCAATGAAAGTGGTAAATTTTTGCCTCAAAATTGCATTGATGTGCCTCAGAATGAGGTCATTGAATGTGAGGTTACTGAGTGCTTGAAGCCAGTCGTTAGTGACAGCAGCAAAGCGAATGTCATCTCTGAGGTTGTGAAAGAGGTCAAATGTAAAGGATCAGAGGAGGATATGAATTCTGCTACAATTTCTGATGACTGTTTGGGTGAAAAGGGTGTTTTGGGCCTCCATTCAAGTTCGTCTTTGACTGATGGAGGGGATTGCCTTCCACAAGGATCACCACCAAATTTGTCAGTTTGCAATGTTTCTACATCAGACAGTAGCAATGTCCTTCAAAATAATGGCAGTTGTAGTCCTGATGTACATTTTCACCAGAAGCAAACTTTGTCTGTTCCTATTGTTGATGAAAGGAAAGATGGGTCAGCTGCAACTCAAAGATCAAGATCCATGGGCAAGTCCACTGAAGCAGGACACGCTGCTTTGCTGTATTTTGAAGCAATGCTTGGGACATTGACAAGAACAAAGGAATGTATTGGTCGAGCAACACGGATAGCTATTGACTGTGCCAAGTTTGGCATTGCAGCTAAGGTGGTAGAAATTCTAGTCCACCGACTGGAAACTGAGTCAAGCCTGCATCGAAGGGTGGATTTGTTTTTTCTTGTTGACTCTATTACTCAGTGTTCTCGTGGTGATGTTGGTGGAGTATATCCATCTGCTATCCAAGCAATCCTGCCACGCTTGTTGTCTGCTGCTGCTCCTCCTGCTAGTACTGCTCAAGAAAATCGTAGGCAGTGTCTTAAGGTTTTAAGATTGTGGTTGGAGAGGAGAATTTTACCCGAATCCATTATTCTTCACCATATCCGGGAACTGGATTCCTATAGTTTTTCTGCTTCTGCAGGTGCCTTCTCACGACGCACATTAAGAACCGAGAGGGCTATAGATGACCCTGTGAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTGCCTGGATTTTGCATGCCACGAATGCTTAAAGATGAAGATGAAGGGAGTGATTCAGATGGAGGAAACTTTGAGGCTGTAACACCTGAGCATGGTTCTGAAACACATGATGTAAATGAAATGATTCCTGCAATTGAAAAGCACAGACATATCTTGGAGGATGTTGATGGTGAACTTGAAATGGAAGATGTAGCTCCCTGTCACGATGTAGAAATGAATGCATTTTGTAATGTTGATGGAGGAAATGCTGAACAAGCTTCACATACTCATGTTGAGAAGAGTCTTCCTCTGTCCTTTGGCCCTCTGCCTCAGGATTTTTCTCTATCTTCCCCACCACCACCATTATGCCCTCCACCTCTGCCTCCACCTCCACCACCTCCATCTTCTTCCCTGCACCTCTTGTCAACTGGTTCTGATTCATATGGCACTGCAGTTGATTCAAAACTTTATACAGATGCACAGACTCTGCAGGATAATTCACTCCACTCTATTACTCCGCCCTTGGCTGCACCAAGGAGGAGCCAACCTATCAGTGAGGCTGCACACTGTCAAGTCCCAGAATGTAGAGACATGCAGATGCAGATTCCTGAATCTACTTGCTCTTTCAGCAGTTTCCCTATACCACCACCAGCAGACAATTTTCAACATTCTGGTGTCACCATGCACAAGCCTTTACGGCCACCTCACCATGTGCCATCCAATCAGTTCTCTTTTGTTTGTGGGGAACAGCATGTGAAGCCTCAGAGGGAGCTTCCACCCCCTTTATACTCTAACAGGCACCACATTGTGCAGAACATGGAGAGAGAAAACTTTTATAATAATCATGAGAGATTAAAACCACCTCCATATGACTACCAAGAGAGTTGGAGAGTTCCTGCTCCATACACTGGTATGATTCTAGTCCTCAGTTTCAGGACAAAGGCGTGCCTGCCCCATATGGTTGCCATCCATGTGAATCAACTAGATTTCCAGACAATGGGTGGAGATTTCCTCCCCGGTCAATGA 4149 0.4324 MAPSRKKGASKAAAAAAARRQWKVGDLVLAKLKGFPAWPATVSEPEKWGYSTDWKKVLVYFFGTQQIAFCNPADVEAFTEEKKQSLVKRQGKGADFVRAVQEIIDSYEKLKSQSQVEENNSGGKVTGADVSNTVDSSANLSLKNETEAPGLTLNSQMKSLISVMDRREPICAAEEASDAVLGDESLNNEASLEEPTDNPAAIVKSPLSISGSSQKRSADLCPQGQRNVSVRRSRSSSRVQNFVMPCSDGGKSAGNILANAVQSVPLRRNRCIKKSPNLFGCDDVESSAFASKGSLEDNGSDIFTIDSDACSLNEGSTIDSNFNLEHAETIKSLEGDVELNNRLDLEIKAVVNKKKRKPNRKRATNDAAKPIITPDEEAVVPNTSQSSQNMCGHLKERCSEQDGDEHLPLLKRARVRMSKSSSTETELNSISQAREKRSKEDYVNSLQQKITSSKSENVSPADEDSSLFNGDLDNVSPSKNLASCSENGLQICQIKQDQTLGPSVDGEAALPPTKRLHRALEAMSANVAEEGEAQTEASCAIMTSSGRCCISSITRCPCMPISSQGQEENGLELVGVDSCGIDSSHINVNGFSASSNPMIFKENESSIEVEKQLIKFNNLEICKDGHPDASDQVLDLIDSVVRQTSGTDSKIQLRSILSPNLDTKCYEVGNNQDSPGLLLPPNEHEDNIRTVDHSNKASDTSEHTRISVDLVSVANESGKFLPQNCIDVPQNEVIECEVTECLKPVVSDSSKANVISEVVKEVKCKGSEEDMNSATISDDCLGEKGVLGLHSSSSLTDGGDCLPQGSPPNLSVCNVSTSDSSNVLQNNGSCSPDVHFHQKQTLSVPIVDERKDGSAATQRSRSMGKSTEAGHAALLYFEAMLGTLTRTKECIGRATRIAIDCAKFGIAAKVVEILVHRLETESSLHRRVDLFFLVDSITQCSRGDVGGVYPSAIQAILPRLLSAAAPPASTAQENRRQCLKVLRLWLERRILPESIILHHIRELDSYSFSASAGAFSRRTLRTERAIDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKDEDEGSDSDGGNFEAVTPEHGSETHDVNEMIPAIEKHRHILEDVDGELEMEDVAPCHDVEMNAFCNVDGGNAEQASHTHVEKSLPLSFGPLPQDFSLSSPPPPLCPPPLPPPPPPPSSSLHLLSTGSDSYGTAVDSKLYTDAQTLQDNSLHSITPPLAAPRRSQPISEAAHCQVPECRDMQMQIPESTCSFSSFPIPPPADNFQHSGVTMHKPLRPPHHVPSNQFSFVCGEQHVKPQRELPPPLYSNRHHIVQNMERENFYNNHERLKPPPYDYQESWRVPAPYTGMILVLSFRTKACLPHMVAIHVNQLDFQTMGGDFLPGQ 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0607 1382 CDD PWWP_HULK 25 113 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 1135 1186 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 444 471 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 1061 1083 - -
Glsi11g0607 1382 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1110 - -
Glsi11g0607 1382 ProSiteProfiles CID domain profile. 869 1007 IPR006569 -
Glsi11g0607 1382 SMART 558neu5 876 1004 IPR006569 -
Glsi11g0607 1382 SMART PWWP_4 22 79 IPR000313 -
Glsi11g0607 1382 Pfam PWWP domain 25 107 IPR000313 -
Glsi11g0607 1382 SUPERFAMILY Tudor/PWWP/MBT 19 114 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 1154 1178 - -
Glsi11g0607 1382 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Glsi11g0607 1382 Gene3D - 14 118 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 415 471 - -
Glsi11g0607 1382 MobiDBLite consensus disorder prediction 209 234 - -
Glsi11g0607 1382 Pfam CID domain 877 996 IPR006569 -
Glsi11g0607 1382 Gene3D - 875 1009 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0607 Glsi-ChrGlsi11 3829296 3839593 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3227 02 80472745 80490069 Glsi11g0607 11 3829296 3839593 CCT
Glsi11g0607 11 3829296 3839593 Glsi11g0607 11 3829296 3839593 ECH