Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3227 ATGGCGCCTAGTCGCAGAAAGGGTGCTAGCAAGGCAGCCGCGGCTGCCGCTGCTCGCCGCCAATGGAAGGTCGGCGATCTTGTCCTTGCTAAAGTTAAAGGCTTCCCTGCTTGGCCTGCCGCGGTAGGTGCTTCTTTTCTGTTTCTACCAAAATTATCTATTTTTTCGAACTGTGCTGTTGAGAATATCCTTTTGTTAATTGTGTTGGATTGCATGTTGCTCTGTACTGAGCTTTTGCTTTTGTGTCGACTTTGTATTTTATTTTGGTACAGTGTAACGGATTGCCAGGTAAGCGAGCCGGGGAAGTGGGGTTACTCCACTGACTGGAAGAAAGTACTTGTTTGCTTCTTTGGAACCCAACAGATGTGTTTAACTTTTAAGAACAACACTAAACAAGGCTCTAGGTGGTGGCCACCATTTGTGTATGACCATGTCCCTAATGTTTCAGCTTCTGTTTCCTCCCATGTTGAGTTGATATCCAAGGACAAGAAAGCTTTCTGCAATCCTGCTGATGTTGAAGCATTTACTGAAGAGAAGAAACAATCTCTTGTCAAACGTCAGGGAAAGGGTTCTGACTTTGTTCGTGCAGTACAGGAGATTATTGATAGTTATGAAAAATTGAAAGAGACCCAAGTTGATGAAATCAATTCTGGTGGTGATGTTGCTGGTGCAAATGTTACTATTCCTACTGACTCATCATCCAACTTTGGGTTAAAGGATAGGACAGAATCTACTGCGTTGATGCATAATTCACAAATGAAATCTTCAAATACTTTCTCTGACCAACATGAGTCCTCAGCTGCTGCACTGAAGGATGAAACTCTTAATAAAGAGGCTTCATTGGAGGAGCCTAATTATAATGCTGCTGCTACTGTAAAATCAACTTTGCCAGTTACTTACTCTTCTCGAAAGAGATCTGTAGACTTACGATCACAGGGTAATGTCACACAGAGAAATGCACCAGTTCGAAGGTCTAGAAGCTCATCACGGATCCAGAACTTTGTGATGCCTTGTATTGATGTTGGAAAGAGTGCTGAGGATGTATTAGCTAATGCAGTTGAGAATGTTTCTGTGAGAAGAAACAAACGTTTTAGGAAATCGCCTGAAATTACTGGCTGTGATGATATTGACACATCTGGTTTTACATCAAATGGTAGCATGGAAGATAATGGTTCCGAAATTCTCACAATTGATTCTGATGCCTTTAGCCTGAATGAGGGCAGTACCATGGACTCAAATTGTAAACTTGAATACTCTGAGATCATTGAATGCCCAGAAGGAGAAGTTGAGTTGAACAAAGGGTTGGATCTTGAAATAAAGGCTGTATTCAATAAGAAAAAAAGAAAGCCAAACCGGAAGCGGGCAGCAAATGATTCTGCGAACCCAACCACTACACCAGAGGAGGAAGCTGGTGTGCAGTATACCAGTCAAAGTTCACAGAATGTTTGTGGAAATTCAAAAGATCGATGCTCCAAGCAAGATAGTGATGAACACCTGCCCCTTTTAAAACGAGCCAGAGTCAGACTGAGTAAATCATCATCCCCAGACACTGAAAACAATAGCATTCTACAAGCTGAAGATAAAAAATCTGTAGAAGATAGTATCAATTCATTGCAGCATATGACATGCTCAACTTATGAGAATGGTAGTGTTGCTGATGGAGACTTGTCCGCATTGAATGGAGTGTTGGACAGTGTTTCTCCTTCAAAGAGTTTAGCCCAATGTTCTGAAAGTGGGTCTCAGATTTGTAAAATTGAGAAAGACCAAACATTTGGCTGCTCTGTGGATGGTGAAGCCGCTTTACCACCATCTAAACGTCTCCATCGTGCTTTAGAAGCTATGTCAGCTAATGCTGCTGAAGATGGTCAAGGTTGTGCAGAAGTATCATCCCCCATGACATCAAATGGTAGATGCTGTATATCTTCTATCAAAAGATGTCCTTGTATGTCCTATAATTGGCAAGGAGGGAATGGTTTAGAACTGGAAGGGACGGACCCTTGTGGTACTGAATCCTCACATTTTAATGTGTGTAGTTTCTCAGTCAATTCAAATCCAATAATTTATAACTCTACAGAGAATAAATCATCTACAGAAATGGATAAGCAATCCACTAAGTTTCAAGACCATGGAATTTGCAAGGATGCCCAACCAGGTGCCAAAGACCAAGAATTTGGCAAAGAGCTTACTGATTCTGTGATTCCTCACACTACTGGATCTGGCTCCCAAATTCAGTTACTCGGAAATCTGTGTCCTAATCTGGACACAAAATGTTGTGAAGTTGGAAGCAGTCAAGATTTGCCAGGTCCATCGATGCTACCAAATGGTGAAGACAATATCAGAACTGTCGACCAGCCAAATAAAGCATCTGACACATCAGAACATATTGGGGTAAGTCTTGATGCTGTATCAGTTGTCAATGGAAGTGATAAATATCCACCTCAAAATATTACTGAACAGCCTCAGAATGAAGTTGCTGAGGATACCAAGTGCTTGAAACCAGCAGTTGGTGATAGCAGCAAAGTGAATGACATGTGTGATGTTGTGAAAGAGGTCAAATGTAAGGGGCCAAAAGAGGATGTGAATTCTGTTTCAATTTCTGATGCTTGTTTTGGTGAAAAGCATATTTTGTGCCTTCAATCAAGTCCATCTTCGACTGATGTGGGAGATTGCGTTCCCCAAGGATCCCCGCAAAATACATCAGTTTGCAATGTTTGTACATCAGACAGTAGCAATATCCTTCAAAATAATGGAAGTTGTAGTCCTGATGTACATTTACACCCGAAGCAAACTTTGTCTGGTCCAATTGTTGATGGACAGAAAGATGGGTCTGCAGCAACTCAACGATCAAAATCCATGGGCAAGTCCACGGAAGCAGGACATGCTGCTCTGTTGTACTTTGAAGCAATGCTTGGGACATTGACAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATAGCTATTGACTGTGCCAAGTTTGGCAATGCAGCTAAGGTTGTAGCTATTCTTGCCCACAGTCTGGAAACTGAGCCAAGCCTGCATCGAAGGGTGGATTTGTTTTTTCTTGTGGATTCTATCACACAGTGTTCTCGAGGTTTAAAAGGTGATGTTGGTGGATTATATCCATCTTCTATCCAAACAGTCCTGCCCCGCCTATTGTCAGCTGCCGCTCCTCCTGGAAATGCTGCACCAGAAAATCGTAGGCAGTGTCTTAAGGTTCTAAGGTTGTGGTTGGAGAGAAGAATTCTACCGGAGTCCATTATTCGTCATCATATCCGAGAACTGGACTTATGTAGTGGGTCAGCCTCTGCTGGTGTCTTCTCACGACGCTCTTTAAGAACAGAAAGGGCTTTAGATGACCCTGTTAGAGAAATGGAGGGTATGCTTGTTGACGAATATGGAAGCAACTCAAGTTTTCAGCTGCCTGGATTTTGCATGCCCCGAATGCTTAAATATGAAGATGAAGGGAGCGATTCTGATGGAGGAAACTTTGAGGCTGTCACTCCAGAGCATAATTCTGAAACAAATGAGGTACATGAAATAACTCCTGCACTTGAAAAGCACAGACATATCTTGGAAGATGTTGATGGTGAGCTTGAAATGGAAGATGTAGCTCCCTCTTGTGATGTTGAAATGAATTCATTTTTTAATGTCAATGGAGGAAACACCACACAGGTGTCACATAATCAGGTTGCGAAGAATATTTCTGTGTCCTTTGGCCCTTCTTTACCTCAGGATGTAGCTCCATCGCCACCACTGCCATCATCACCTCCACCTCCTCCCCCACCTCCACCTCCTTCCCTGCACCTCAAGTCAGCTATTTCTCATCCATATGGTACCACGGTTGTTCCAGAACTTTATAAAGATGCACAGACTCTGCAAGATAACTCACTCTCCTCTATGACACAGCCTTTGGCTACTCCAAGGAATAGCCAACCTACATGTGAGGGAGTGCACTATCAAGTTCCAGAATGTAGGGACCTGCCGATCCAGAAGATACCTGAGTCTACTTCTTTCTGCAGTTTTCCTTTACCACCACCTGACAATTTTCAGTATTTTGATGGCGTTACCATGCATAATAAAGGTTACCCTTTATGTCCACCGCACCATGTGCCCTCCAATCAGTTTTCTTTTGTTCGGGGGGATCAGCATGTGAAGCCACAGAGGGAGGTTCTGCCCCCTTCATACCTCAATAGGCACCACTCTCTGCAAAATATGGAGAGAGATCATTTGTGCAATAATCATGAGAGATTAAAACCACCTCCTTGTGACTTTCAAGAGAGATGGAGAGTTCCTGCTCCGCCATCTGGTCCTCGGTATCAGGACAAAAGTGTGCCTGCCCCTTATGGTTGTCATCCATGTGAATCAACTAGATTACCAGACCATGGGTGGAGATATCCTCGGTCAATGAATCACAGGAACTCCATGCCTTTTAGACCACCCTCTGGAGATGCAATTCCAGTGGCAAGTAGAGGTCCAAGCTTTTGGCGGCCAAGATGA 4500 0.4322 MAPSRRKGASKAAAAAAARRQWKVGDLVLAKVKGFPAWPAAVGASFLFLPKLSIFSNCAVENILLLIVLDCMLLCTELLLLCRLCILFWYSVTDCQVSEPGKWGYSTDWKKVLVCFFGTQQMCLTFKNNTKQGSRWWPPFVYDHVPNVSASVSSHVELISKDKKAFCNPADVEAFTEEKKQSLVKRQGKGSDFVRAVQEIIDSYEKLKETQVDEINSGGDVAGANVTIPTDSSSNFGLKDRTESTALMHNSQMKSSNTFSDQHESSAAALKDETLNKEASLEEPNYNAAATVKSTLPVTYSSRKRSVDLRSQGNVTQRNAPVRRSRSSSRIQNFVMPCIDVGKSAEDVLANAVENVSVRRNKRFRKSPEITGCDDIDTSGFTSNGSMEDNGSEILTIDSDAFSLNEGSTMDSNCKLEYSEIIECPEGEVELNKGLDLEIKAVFNKKKRKPNRKRAANDSANPTTTPEEEAGVQYTSQSSQNVCGNSKDRCSKQDSDEHLPLLKRARVRLSKSSSPDTENNSILQAEDKKSVEDSINSLQHMTCSTYENGSVADGDLSALNGVLDSVSPSKSLAQCSESGSQICKIEKDQTFGCSVDGEAALPPSKRLHRALEAMSANAAEDGQGCAEVSSPMTSNGRCCISSIKRCPCMSYNWQGGNGLELEGTDPCGTESSHFNVCSFSVNSNPIIYNSTENKSSTEMDKQSTKFQDHGICKDAQPGAKDQEFGKELTDSVIPHTTGSGSQIQLLGNLCPNLDTKCCEVGSSQDLPGPSMLPNGEDNIRTVDQPNKASDTSEHIGVSLDAVSVVNGSDKYPPQNITEQPQNEVAEDTKCLKPAVGDSSKVNDMCDVVKEVKCKGPKEDVNSVSISDACFGEKHILCLQSSPSSTDVGDCVPQGSPQNTSVCNVCTSDSSNILQNNGSCSPDVHLHPKQTLSGPIVDGQKDGSAATQRSKSMGKSTEAGHAALLYFEAMLGTLTRTKESIGRATRIAIDCAKFGNAAKVVAILAHSLETEPSLHRRVDLFFLVDSITQCSRGLKGDVGGLYPSSIQTVLPRLLSAAAPPGNAAPENRRQCLKVLRLWLERRILPESIIRHHIRELDLCSGSASAGVFSRRSLRTERALDDPVREMEGMLVDEYGSNSSFQLPGFCMPRMLKYEDEGSDSDGGNFEAVTPEHNSETNEVHEITPALEKHRHILEDVDGELEMEDVAPSCDVEMNSFFNVNGGNTTQVSHNQVAKNISVSFGPSLPQDVAPSPPLPSSPPPPPPPPPPSLHLKSAISHPYGTTVVPELYKDAQTLQDNSLSSMTQPLATPRNSQPTCEGVHYQVPECRDLPIQKIPESTSFCSFPLPPPDNFQYFDGVTMHNKGYPLCPPHHVPSNQFSFVRGDQHVKPQREVLPPSYLNRHHSLQNMERDHLCNNHERLKPPPCDFQERWRVPAPPSGPRYQDKSVPAPYGCHPCESTRLPDHGWRYPRSMNHRNSMPFRPPSGDAIPVASRGPSFWRPR 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3227 1499 ProSiteProfiles CID domain profile. 958 1099 IPR006569 -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 1238 1273 - -
Glsi02g3227 1499 Gene3D - 132 214 - -
Glsi02g3227 1499 SUPERFAMILY Tudor/PWWP/MBT 133 210 - -
Glsi02g3227 1499 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 121 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 1245 1270 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 1475 1499 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 489 504 - -
Glsi02g3227 1499 SMART 558neu5 965 1096 IPR006569 -
Glsi02g3227 1499 SUPERFAMILY Tudor/PWWP/MBT 19 124 - -
Glsi02g3227 1499 Pfam CID domain 966 1089 IPR006569 -
Glsi02g3227 1499 FunFam Enhancer of ag-4 2 960 1101 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 307 327 - -
Glsi02g3227 1499 Gene3D - 3 131 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 932 953 - -
Glsi02g3227 1499 Gene3D - 964 1098 IPR008942 -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 456 488 - -
Glsi02g3227 1499 MobiDBLite consensus disorder prediction 446 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3227 Glsi-ChrGlsi02 80472745 80490069 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3227 02 80472745 80490069 Glsi11g0607 11 3829296 3839593 CCT
Glsi02g3227 02 80472745 80490069 Glsi02g3227 02 80472745 80490069 ECH