Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0595 ATGGCGGCTGGGCCAGCATCGCCGACCGATCCTGCTTCTTCGGTGGGGCCAACTATGGTGCCGATGCAATCAAAACCCATGATGGTGTCGGACTCCTTCGCCAAGGACACCATCATTGCTTGGTTCCGTGGCGAGTTTGCGGCCGCGAACGCCATCATCGACGCTCTCTGTGGTCACCTGTCTCAGCTCAGCGCCGACACCGGCGGCTCCGACTATGATTCAATCTTCGCCGCAATTCATCGCCGGCGAATGAATTGGATCCCGGTGATACAGATGCAGAAGTATCACTCTATAGCCGAAGTGACCGTGGAGCTTCGCAAAGTCTCAGAGAAGAAAACAGAGCCCGAGGAAAAGAGTGAGGAAGTGAACACTTGTATGGACGAGAAGGAAAAAATCAACGAGAAAGTGATGGAAAATAATGGAAACGGCGGTGACGAGGCTGCTGAAGAGTATGATTCGCCGGACAGTGAGATTACCGATTCAGGATCTCAAGAAATGCAGGCTAGTTTGATGAACAGTAGTATATGTTCCAAGCATGAAGAATGCGAAGGACGCGCTTCCCAGATAAAGTTGACAAAAGGTTTCTCGGCAAAGGAGTCGGTGAAGGGGCATATGGTGAATGTTGTAAAAGGATTAAAGTTATATGAGGATGTTTTCACCGATTCAGAACTCTGCAAGCTGATTTATTTTGTCAACGAGATCCATTCCGCTGGCCAGAATGGAGAACTCTCGGGGGAAACTTTTATCCTATTCAATAAACAGATGAAGGGGAACAAGAGAGAGCTGATTCAGCTCGGTGTTCCAATTTTTGGACAGATAAAGGAGGATGCAAAAAGCAATATAGAGCCAATTCCAGCTCTTCTCCAAGGTGTCATTGATCACCTTATTCAATGGCAACTACTTCCAGAGTACAAGAGACCAAATAGTTGTATCATCAACTTTTTTGAAGAGGGGGAATATTCTCAGCCATTCCAGAAACCACCCCATCTGGACCAACCCGTGTCCACTCTTGTTCTCTCAGAATCAACTATGGCTTTTGGGCGTATCCTTATGAGCGACAATGACGGGAACTACAAAGGACCACTCATGCTCTCCCTGAAGAATGGGTCTCTTCTAGTGATGAGAGGAAACAGTGCTGATACGGCAAGACATGTAATGTGTCCGTCACCTAACAGAAGGGTCACCATCACCTTTTTTAGAGTGAGGCCAGACTCCAATCGATGCCAATCACCAACTCCTTCCATGGCAAGTGCAATGACACTTTGGCAACCTGATATTGCTAGTCCATATGCGTTGCCAAATGGAGCCGTCAGTGGCAATGACGCCCTGGATATGATGCCCAAATGGGGAATTATTCGAACCCCAATGGTCATGCTAACACCTATGCGCCCTATGGCATTGAATCCCCGCAAGCTTGCTTGTGGTGGGACTGGGGTGTTCTTACCCTGGAAAGTGCCATCGAGAAAACCTGCAAAGCATCTTCCACCGCGTGCCCAGAAAGGACGGCTTCTGACGTCACCTTCCCCAGTTGAATCACACATGGCAGAGTCCACTTCCGACCCCAGTATTAGTGTTGAAGGACAGAGGGGTAGCCAACTAGCCATCTACCATTTCAATGAGGACCTGTTAAGGTTTGTAGTTGAAACTGGGGAATTAACGGTTGAGGGCTTAATCATTTTTAAGTACCTTAAGAGCAGCTTTTGGTAG 1707 0.481 MAAGPASPTDPASSVGPTMVPMQSKPMMVSDSFAKDTIIAWFRGEFAAANAIIDALCGHLSQLSADTGGSDYDSIFAAIHRRRMNWIPVIQMQKYHSIAEVTVELRKVSEKKTEPEEKSEEVNTCMDEKEKINEKVMENNGNGGDEAAEEYDSPDSEITDSGSQEMQASLMNSSICSKHEECEGRASQIKLTKGFSAKESVKGHMVNVVKGLKLYEDVFTDSELCKLIYFVNEIHSAGQNGELSGETFILFNKQMKGNKRELIQLGVPIFGQIKEDAKSNIEPIPALLQGVIDHLIQWQLLPEYKRPNSCIINFFEEGEYSQPFQKPPHLDQPVSTLVLSESTMAFGRILMSDNDGNYKGPLMLSLKNGSLLVMRGNSADTARHVMCPSPNRRVTITFFRVRPDSNRCQSPTPSMASAMTLWQPDIASPYALPNGAVSGNDALDMMPKWGIIRTPMVMLTPMRPMALNPRKLACGGTGVFLPWKVPSRKPAKHLPPRAQKGRLLTSPSPVESHMAESTSDPSISVEGQRGSQLAIYHFNEDLLRFVVETGELTVEGLIIFKYLKSSFW 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0595 568 MobiDBLite consensus disorder prediction 1 21 - -
Glsi11g0595 568 Gene3D - 195 410 IPR037151 -
Glsi11g0595 568 MobiDBLite consensus disorder prediction 490 526 - -
Glsi11g0595 568 SUPERFAMILY Clavaminate synthase-like 202 402 - -
Glsi11g0595 568 MobiDBLite consensus disorder prediction 510 526 - -
Glsi11g0595 568 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 306 403 IPR005123 -
Glsi11g0595 568 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 34 507 IPR044842 GO:0003729|GO:0006402|GO:0032451
Glsi11g0595 568 MobiDBLite consensus disorder prediction 136 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0595 Glsi-ChrGlsi11 3765966 3770918 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3239 02 80554785 80561725 Glsi11g0595 11 3765966 3770918 CCT
Glsi11g0595 11 3765966 3770918 Glsi11g0595 11 3765966 3770918 ECH