Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3239 ATGCCGATGGCCGCTGGCCCTGCATCTCCGACGATCGATCGTGCTCCTCCGGTGGGGCCAGCAATGCTACCGATGCAATCGTCCCCCGTGATGGTGTCTGACTCCTTCGCCAAGGATGCCATCATTTCCTGGTTCCGCGGCGAGTTTGCGGCGGCCAACGCCATCATTGACGCCCTATGCGGTCACCTGGCTCAACACACCGCCGCCTCCGGAAATTCTGACTACGACTCGGTCTTCGCCGCAATTCATCGCCGGAGACTCAACTGGATCCCGTTGCTCCAGAATCAGAAGTATCACTCGATAGCTGACGTGGCGGTGGAGCTCCGTCAAGTCACGGAGAAGAAAACGGAGGTTAAGGAAAACGGTGACGGTGGGAAGAGGAGTGAGGATGCGAAGAGTAGATTGGATGAGAAAGAGAAAATCGAAAAGAAAGAGATGGAAAGTAATGAAAATGGCGGCGACGAAGGTGCTGAAGAATATGATTCGCCTGACAGTGAAATTACTGATACGGGATCTCAAGAAATGCAAGCCAGTTCAATGAACATTAATATATGTTCAAACCATGAAGAATGCGAAGAACGTTCTTCCCAGATAAAGTTGACAAGAGGTTTCACGGCAAAGGAGTCAGTGAAGGGGCATATGGTGAATGTTGTGAAAGGATTGAAATTATATGAGGACATTTTCACTGATTCAGAACTCTGCAAGCTCACCCATTTTGTCCATGAGATTCATGCTGCTGGCCAGAACGGGGAACTCTCTGGGGAAACTTTTATACTATTTAACAAGCAGATAAAGGGGAACAAACGAGAGATGATTCAGCTGGGTGCACCAATTTTTGGACAGATAAAGGAGGATGCAAAAACTAAAATAGAGCCAATTCCATCTATTCTCCAAGGTGTCATTGATCACCTTATTCAATGGCAACTGCTTCCAGAGTACAGAAGGCCAAATGGTTGCATCATAAACTTTTTTGAAGAGGGGGAACATTCTCAGCCATTCCTCAAACCACCGCACCTGGACCAACTTCTGTCCACTCTTCTTCTCTCTGAATCAACTATGGCTTTTGGGCGTATCCTTATGACCGAAAATGATGGAAACTACAAGGGTCCACTCATGCTCTCATTGAAGAAAGGGTCTCTTTTAGTGATGAGGGGAAATAGTGCAGACATGGCGAGGCACGTAATGTGTCCATCCCCAAACAAAAGGGTCAGCATCACCTTCTTCAGAGTGAGACCAGACTCCAATCAATGCCTATCACCAACTCCCCCCACGTCAAATGCCATGACTCTTTGGCAACCTGGCATTGCTAACTCATATGCTTTGCCAAATGGAGTTCTCAGTGGGCATGAGGCAATGGATATGATGCCCAAATGGGGACTTCTTCGGGCCCCAATGGTCATGCTAACCCCTATAAGCCCTATGGTATTGAACCCCCGCAAACTTCCTCGTGGGGGGACTGGGGTGTTCTTGCCCTGGAATGTGCCATCCAGAAAACCTGCAAAGCATCTTCCACCCCGTGCCCAAAAAGGACGGCTTCTGGCATTACTTTCCCCAGTTGAATCACAAATGGCAGAGTCTTCTTCCCAACCCAGCATTAGTGTTGAAGGCCAAAATATGAATGTGGGATCAAATTTTCTAGCCAAACGGAAAAAAATAATGGATATGCCAACGAGTATGTCCAAAACAATGGAAAAAATGAATGAGAAAAGATATTATTATAGAGACAGTTGCCTTTCATACATTCAGATATAA 1752 0.4703 MPMAAGPASPTIDRAPPVGPAMLPMQSSPVMVSDSFAKDAIISWFRGEFAAANAIIDALCGHLAQHTAASGNSDYDSVFAAIHRRRLNWIPLLQNQKYHSIADVAVELRQVTEKKTEVKENGDGGKRSEDAKSRLDEKEKIEKKEMESNENGGDEGAEEYDSPDSEITDTGSQEMQASSMNINICSNHEECEERSSQIKLTRGFTAKESVKGHMVNVVKGLKLYEDIFTDSELCKLTHFVHEIHAAGQNGELSGETFILFNKQIKGNKREMIQLGAPIFGQIKEDAKTKIEPIPSILQGVIDHLIQWQLLPEYRRPNGCIINFFEEGEHSQPFLKPPHLDQLLSTLLLSESTMAFGRILMTENDGNYKGPLMLSLKKGSLLVMRGNSADMARHVMCPSPNKRVSITFFRVRPDSNQCLSPTPPTSNAMTLWQPGIANSYALPNGVLSGHEAMDMMPKWGLLRAPMVMLTPISPMVLNPRKLPRGGTGVFLPWNVPSRKPAKHLPPRAQKGRLLALLSPVESQMAESSSQPSISVEGQNMNVGSNFLAKRKKIMDMPTSMSKTMEKMNEKRYYYRDSCLSYIQI 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3239 583 MobiDBLite consensus disorder prediction 116 151 - -
Glsi02g3239 583 Coils Coil 101 121 - -
Glsi02g3239 583 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 37 523 IPR044842 GO:0003729|GO:0006402|GO:0032451
Glsi02g3239 583 MobiDBLite consensus disorder prediction 1 20 - -
Glsi02g3239 583 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 315 412 IPR005123 -
Glsi02g3239 583 MobiDBLite consensus disorder prediction 116 175 - -
Glsi02g3239 583 Gene3D - 204 417 IPR037151 -
Glsi02g3239 583 SUPERFAMILY Clavaminate synthase-like 213 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3239 Glsi-ChrGlsi02 80554785 80561725 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g3239 02 80554785 80561725 Glsi11g0595 11 3765966 3770918 CCT
Glsi02g3239 02 80554785 80561725 Glsi02g3239 02 80554785 80561725 ECH