Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi11g0553 ATGGAGGTGATCACAAGCATGGTAGCTGAAAAGCCCGTGGTGATATTCAGCAAGAGCACCTGTTGCTTGAGCCACTCCATCAAGTCACTGATATGTGGCTTTGGGGCAAACCCCACGGTTTATGAGGTTGATGAAATGACGAATGGGCAGCAGATTGAAAGGGCATTGCTTCAACTGGGGTGCCAACCAAGTGTACCAGTTGTGTTTATAGGGCAACAATTCATTGGGGGTTCTAACAAAATCATGAGCCTGCATCTCCGGAATGAGTTAGTACCACTGCTCATGAATGCCCGAGCTATATGGATTTGGAACAAAAAGTGA 321 0.4673 MEVITSMVAEKPVVIFSKSTCCLSHSIKSLICGFGANPTVYEVDEMTNGQQIERALLQLGCQPSVPVVFIGQQFIGGSNKIMSLHLRNELVPLLMNARAIWIWNKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi11g0553 106 Pfam Glutaredoxin 13 75 IPR002109 -
Glsi11g0553 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Glsi11g0553 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Glsi11g0553 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Glsi11g0553 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Glsi11g0553 106 CDD GRX_GRXh_1_2_like 12 93 - -
Glsi11g0553 106 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
Glsi11g0553 106 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Glsi11g0553 106 Gene3D Glutaredoxin 2 105 - -
Glsi11g0553 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi11g0553 Glsi-ChrGlsi11 3569501 3569821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi11g0553 1 102 Miscellaneous Gene Families AT4G15690 58.824 2.88e-44 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0553 11 3569501 3569821 Glsi02g3306 02 80934903 80938289 CCT
Glsi11g0553 11 3569501 3569821 Glsi11g0553 11 3569501 3569821 ECH