Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g3306 ATGATGGACATGATCACAAGCATGGTAGCCGAAAAGCCTGTGGTAATATTTAGCAAGAGCACCTGTTGCTTGAGTTACTCCATCAAGTCTCTGATAAGTAGTTTTGGGACAAACCCCACTGTTTACGAGCTTGACCAAATCACCAATGGGCAGCAGATTGAGAGGGCATTGCTTGAACTGGGATGCCAACCAAGTGTGCCAGCAGTGTTCATAGGGCAACAATTCATAGGCGGTGCTAACAAGATCATGAGCCTGCATGTCCGGAATGAGTTAGTGACACTGCTCATGAATGCCGGAGCCATTTGGATTTGGAATAAAAACACATTGTATTGTTTTGATGCTCAAATAGTGAATAGTGTTGGGTATCAGAGGTTTGTGCTAAGAAATCATTATCATGATGAACTTGGTACGAACAATAATCTCCACGTGAACTCTGCAATTCAATTAATGGAAATGGTGACAAGGTTGATAGCTGACAAGCCAGTGGTGATATTCAGCAAGAGCAGCTGTTGCATGAGCCATTCAGTGAAGACTCTGATATGTAGCTTTGGTGCAAACCCAACAGTGATTGAAGTTGACAAGATTCCAAATGGGCAGCAAGTAGAGAGGGCATTGCTACAGCTAGGTTGCAGACCAAGCGTACCGGCAGTGTTCATAGGACAGCAATTCATAGGTGGTGCTAATGAAGTCATAAGCCTCAACGTTCAGAACAAGCTTGCCCAATTGCTTTTAGGGGCCGGAGCTATATTCATCTGGGGGGTCGGTAGCTAG 771 0.4475 MMDMITSMVAEKPVVIFSKSTCCLSYSIKSLISSFGTNPTVYELDQITNGQQIERALLELGCQPSVPAVFIGQQFIGGANKIMSLHVRNELVTLLMNAGAIWIWNKNTLYCFDAQIVNSVGYQRFVLRNHYHDELGTNNNLHVNSAIQLMEMVTRLIADKPVVIFSKSSCCMSHSVKTLICSFGANPTVIEVDKIPNGQQVERALLQLGCRPSVPAVFIGQQFIGGANEVISLNVQNKLAQLLLGAGAIFIWGVGS 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g3306 256 CDD GRX_GRXh_1_2_like 13 94 - -
Glsi02g3306 256 PRINTS Glutaredoxin signature 14 32 IPR014025 -
Glsi02g3306 256 PRINTS Glutaredoxin signature 59 72 IPR014025 -
Glsi02g3306 256 PRINTS Glutaredoxin signature 73 86 IPR014025 -
Glsi02g3306 256 ProSiteProfiles Glutaredoxin domain profile. 150 250 - -
Glsi02g3306 256 SUPERFAMILY Thioredoxin-like 150 249 IPR036249 -
Glsi02g3306 256 ProSiteProfiles Glutaredoxin domain profile. 2 102 - -
Glsi02g3306 256 SUPERFAMILY Thioredoxin-like 2 102 IPR036249 -
Glsi02g3306 256 PANTHER GLUTAREDOXIN 2 103 IPR011905 -
Glsi02g3306 256 Pfam Glutaredoxin 14 76 IPR002109 -
Glsi02g3306 256 Pfam Glutaredoxin 162 224 IPR002109 -
Glsi02g3306 256 CDD GRX_GRXh_1_2_like 161 242 - -
Glsi02g3306 256 NCBIfam glutaredoxin-like family 153 250 IPR011905 -
Glsi02g3306 256 NCBIfam glutaredoxin-like family 6 103 IPR011905 -
Glsi02g3306 256 Gene3D Glutaredoxin 149 251 - -
Glsi02g3306 256 Gene3D Glutaredoxin 2 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g3306 Glsi-ChrGlsi02 80934903 80938289 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g3306 150 251 Miscellaneous Gene Families AT4G15690 53.922 4.16e-36 122
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi11g0553 11 3569501 3569821 Glsi02g3306 02 80934903 80938289 CCT
Glsi02g3306 02 80934903 80938289 Glsi02g3306 02 80934903 80938289 ECH